ReviewRegulation of immune pathways by the NOD-like receptor NLRC5
Introduction
The innate immune system recognizes infections and cellular damage through a limited number of pattern recognition receptors (PRRs) (Kawai and Akira, 2006, Kumar et al., 2009). PRRs are thought to sense conserved microbial components that are vital for microbial survival such as flagellin and nucleic acid structures unique to bacteria and viruses (Akira et al. 2006). It is increasingly recognized that PRRs may also probe the environment for endogenous danger-associated molecular patterns (DAMPs) such as uric acid and HMGB1, which are produced or released upon tissue damage during infection or as a consequence of physicochemical stress. PRR activation triggers a number of protective responses, including the production of pro-inflammatory cytokines and chemokines that are responsible for activation of phagocytes and the recruitment of neutrophils, NK cells and lymphocytes to the site of infection. Moreover, innate immune responses contribute to adaptive immunity by instructing lymphocytes to mount T helper and humoral responses through the presentation of immunogenic peptides on MHC class I and class II receptors of professional antigen-presenting cells (Kanneganti et al. 2007).
Several PRR families can be distinguished, including Toll-like receptors (TLRs), C-type lectin receptors (CLRs), RIG-I-like receptors (RLRs), HIN-200 proteins and nucleotide binding and oligomerization domain-like receptors (NLRs) (Inohara et al., 2005, Kanneganti et al., 2007, Lamkanfi and Dixit, 2009, Meylan and Tschopp, 2006). Much research in recent years has focussed on characterizing the roles and signaling pathways of NLR family members in regulating the immune response. Bioinformatics studies revealed the existence of 22 human NLR genes and recent gene duplications gave rise to 34 mouse NLRs (Kanneganti et al. 2007). These platform proteins are characterized by the presence of a conserved nucleotide binding and oligomerization domain (referred to as NBD; NOD or NACHT domain) and located in intracellular compartments. Notably, the architecture of NLRs resembles that of a subset of plant disease-resistance (R) genes, which are involved in the hypersensitive response against virulent plant pathogens (Inohara and Nunez, 2001, Lamkanfi and Dixit, 2009). NLRs are involved in a multitude of innate immune signaling pathways ranging from the regulation of MAP kinase and NF-κB signaling pathways for Nod1 and Nod2, over modulation of MHC class II genes for CIITA, to the assembly of caspase-1-activating protein complexes named ‘inflammasomes’ for the NLR proteins NLRP1, NLRP3 and NLRC4 (Kanneganti et al., 2007, Lamkanfi and Dixit, 2009). Interestingly, the recently identified NLR family member NLRC5 (also known as NOD27, FLJ21709 and CLR16.1) has been suggested to regulate each of these signaling pathways. Moreover, NLRC5 deficient mice have been generated and used to examine the physiological role of this NLR in regulating immune responses and host defense during bacterial and viral infection in vivo. The recently gained knowledge on the expression, immune roles and signaling pathways of NLRC5 is summarized and critically reviewed in the following paragraphs.
Section snippets
Structure
The human Nlrc5 gene is located at the locus 16q13, spanning a region of about 94 kbp. The full-length mRNA of 6822 bp is encoded by 49 exons, generating a protein that consists of 1866 amino acids (Fig. 1). These features render NLRC5 the largest NLR family member. The protein has a domain architecture characteristic of all NLR members, comprising a centrally located NOD motif that is flanked at the carboxyl-terminus by an array of 20 leucine-rich repeat (LRR) motifs. Alignment of the NLRC5 LRR
NLRC5 expression
The NLRC5 expression profile and regulation of the Nlrc5 promoter activity by microbial components and pro-inflammatory cytokines has been examined in a variety of cells and tissues (Benko et al., 2010, Cui et al., 2010, Davis et al., 2011, Kuenzel et al., 2010, Meissner et al., 2010, Neerincx et al., 2010). Although somewhat discordant results were obtained in one study that reported a ubiquitous expression profile for NLRC5 mRNA in a variety of organs with the lowest transcript levels
Biological functions
Despite progress in understanding the structure and the expression and induction profiles of NLRC5, its role(s) in regulating innate and adaptive immune responses and host defense remains controversial. One set of studies relied on overexpression and short hairpin (sh)RNA-mediated knockdown of NLRC5 to show a role for this NLR protein in dampening the production of pro-inflammatory cytokines in cells stimulated with LPS and poly(I:C) and in response to viral infection (Benko et al., 2010, Cui
Concluding remarks
Recent studies have identified NLRC5 as the largest and a well-conserved NLR family members that contains a rather atypical death domain fold at its amino-terminus and elongated array of more than 20 leucine-rich repeat (LRR) motifs at its carboxyl-terminus. Moreover, consensus is emerging that the NLRC5 promoter and the gene product is regulated by IFNγ, the viral dsRNA mimic poly(I:C) and possibly by other cytokines and microbial components. However, the role(s) of NLRC5 in host defense and
Acknowledgements
This work was supported by National Institute of Health Grants R01AR056296, AR056296 supplements and R21AI088177 and the American Lebanese Syrian Associated Charities (ALSAC) to T.-D.K. ML is supported by the Fonds voor Wetenschappelijk Onderzoek-Vlaanderen and by the European Union Framework Program 7 Marie-Curie grant 256432.
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