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Molecular characterisation of Raspberry bushy dwarf virus isolates from Sweden and Belarus

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Abstract

The complete coding sequences were determined for RNA-1 and RNA-2 of five raspberry isolates of Raspberry bushy dwarf virus (RBDV) from Belarus (BY1, BY3, BY8, BY22) and Sweden (SE3). The analysed sequences for both RNA-1 and RNA-2 were highly conserved among these isolates. Phylogenetic analyses including available sequences for the CP gene and the MP gene showed that all analysed RBDV isolates from raspberry were closely related. However, there was no strong correlation between the grouping of raspberry isolates in the phylogenetic analyses and their geographical location. In contrast, RBDV isolates showed a host-dependent relationship with isolates from raspberry and grapevine, forming two distinct clades.

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References

  1. Åhman G (2002) Virus- och fytoplasma-sjukdomar på hallon. Faktablad om växtskydd 124T (in Swedish)

  2. Barbara DJ, Morton A, Ramcharan S, Cole IW, Phillips A, Knight VH (2001) Occurrence and distribution of Raspberry bushy dwarf virus in commercial Rubus plantations in England and Wales. Plant Pathol 50:747–754

    Article  Google Scholar 

  3. Chamberlain CJ, Kraus JE, Kohnen PD, Finn CE, Martin RR (2003) First report of raspberry bushy dwarf virus in Rubus multibracteatus from China. Plant Dis 87:603

    Google Scholar 

  4. Chard J, Irvine S, Roberts AMI, Nevison IM, McGavin WJ, Jones AT (2001) Incidence and distribution of Raspberry bushy dwarf virus in commercial red raspberry (Rubus idaeus) crops in Scotland. Plant Dis 85:985–988

    Article  Google Scholar 

  5. Ellis MA, Martin RR, Wright SR (2005) First report of raspberry bushy dwarf virus in Ohio. Plant Health Progress PHP-2005-0510-01-HN

  6. Halgren A, Tzanetakis IE, Martin RR (2007) Identification, characterization, and detection of Black raspberry necrosis virus. Phytopathology 97:44–50

    Article  PubMed  CAS  Google Scholar 

  7. Jones AT (2005) Idaeovirus. In: Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) Virus taxonomy: eighth report of the international committee on taxonomy of viruses. Elsevier Academic Press, London, pp 1063–1065

    Google Scholar 

  8. Jones AT, McGavin WJ, Mayo MA, Angel-Diaz JE, Kärenlampi SO, Kokko H (2000) Comparison of some properties of two laboratory variants of raspberry bushy dwarf virus (RBDV) with those of three previously characterised RBDV isolates. Eur J Plant Pathol 106:623–632

    Article  Google Scholar 

  9. Jones AT, Murant AF, Jennings DL, Wood GA (1982) Association of raspberry bushy dwarf virus with raspberry yellows disease; reaction of Rubus species and cultivars, and the inheritance of resistance. Ann Appl Biol 100:135–147

    Article  Google Scholar 

  10. Kokko H, Lemmetty A, Haimi P, Kfirenlampi S (1996) New host for raspberry bushy dwarf virus: arctic bramble (Rubus arcticus). Eur J Plant Pathol 102:713–717

    Article  Google Scholar 

  11. MacFarlane SA, McGavin WJ (2009) Genome activation by raspberry bushy dwarf virus coat protein. J Gen Virol 90:747–753

    Article  PubMed  CAS  Google Scholar 

  12. Mavric Plesko I, Virscek Marn M, Sirca S, Urek G (2009) Biological, serological and molecular characterisation of Raspberry bushy dwarf virus from grapevine and its detection in the nematode Longidorus juvenilis. Eur J Plant Pathol 123:261–268

    Article  Google Scholar 

  13. Mayo MA, Jolly CA, Murant AF, Raschke JH (1991) Nucleotide sequence of raspberry bushy dwarf virus RNA-3. J Gen Virol 72:469–472

    Article  PubMed  CAS  Google Scholar 

  14. McGavin WJ, MacFarlane SA (2010) Sequence similarities between Raspberry leaf mottle virus, Raspberry leaf spot virus and the closterovirus Raspberry mottle virus. Ann Appl Biol 156:439–448

    Article  CAS  Google Scholar 

  15. Medina C, Matus JT, Zuniga M, San-Martin C, Arce-Johnson P (2006) Occurrence and distribution of viruses in commercial plantings of Rubus, Ribes and Vaccinium species in Chile. Cien Inv Agr 33:19–24

    Google Scholar 

  16. Natsuaki T, Mayo MA, Jolly CA, Murant AF (1991) Nucleotide sequence of raspberry bushy dwarf virus RNA-2: a bicistronic component of a bipartite genome. J Gen Virol 72:2183–2189

    Article  PubMed  CAS  Google Scholar 

  17. Špak J, Kubelková D (2000) Epidemiology of Raspberry bushy dwarf virus in the Czech Republic. J Phytopathol 148:371–377

    Google Scholar 

  18. Strik B, Martin RR (2003) Impact of Raspberry bushy dwarf virus on ‘Marion’ blackberry. Plant Dis 87:294–296

    Article  Google Scholar 

  19. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599

    Article  PubMed  CAS  Google Scholar 

  20. Valasevich N, Kolbanova E (2009) Occurrence of small fruit viruses in Belarus. Abstracts of the 21st International Conference on Virus and other Graft Transmissible Diseases of Fruit Crops, Neustadt, Germany, July 5-10, 2009, pp 50–51

  21. Wang Q, Cuellar WJ, Rajamäki ML, Hirata Y, Valkonen JP (2008) Combined thermotherapy and cryotherapy for efficient virus eradication: relation of virus distribution, subcellular changes, cell survival and viral RNA degradation in shoot tips. Mol Plant Pathol 9:237–250

    Article  PubMed  CAS  Google Scholar 

  22. Wood GA (1995) Further investigations of Raspberry bushy dwarf virus in New Zealand. New Zeal J Crop Hort 23:273–281

    Article  Google Scholar 

  23. Wood NT, McGavin WJ, Mayo MA, Jones AT (2001) Studies of a putative second gene in RNA-1 of raspberry bushy dwarf virus. Acta Hort 551:19–22

    CAS  Google Scholar 

  24. Ziegler A, Natsuaki T, Mayo MA, Jolly CA, Murant AF (1992) The nucleotide sequence of RNA-1 of raspberry bushy dwarf virus. J Gen Virol 73:3213–3218

    Article  PubMed  CAS  Google Scholar 

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Acknowledgements

This study was supported by the Visby Program—The Swedish Institute Baltic Sea Region Exchange Program.

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Authors and Affiliations

  1. Department of Biotechnology, Institute for Fruit Growing, Samochvalovichi, Belarus

    N. Valasevich & N. Kukharchyk

  2. Department of Plant Biology and Forest Genetics, Uppsala BioCenter SLU, Uppsala, Sweden

    N. Valasevich & A. Kvarnheden

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  1. N. Valasevich
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  2. N. Kukharchyk
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  3. A. Kvarnheden
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Correspondence to N. Valasevich.

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Valasevich, N., Kukharchyk, N. & Kvarnheden, A. Molecular characterisation of Raspberry bushy dwarf virus isolates from Sweden and Belarus. Arch Virol 156, 369–374 (2011). https://doi.org/10.1007/s00705-010-0912-9

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