Genome data from the Florida carpenter ant (Camponotus floridanus).
Dataset type: Genomic
Data released on November 12, 2011
Here we present the sequenced genome of the Florida carpenter ant (Camponotus floridanus), a species with an organized caste society. As an eusocial species, its genome offers interesting insights into aging, epigenetics and animal behavior. The Illumina Genome Analyzer platform was used to sequence a genomic library of the Florida carpenter ant, obtaining more than 100-fold coverage. The draft genomic assembly reached a scaffold N50 size of ~600 Kb and covers more than 90% of the approximately 240 Mb genome.
Additional details
Read the peer-reviewed publication(s):
- Bonasio, R., Zhang, G., Ye, C., Mutti, N. S., Fang, X., Qin, N., Donahue, G., Yang, P., Li, Q., Li, C., Zhang, P., Huang, Z., Berger, S. L., Reinberg, D., Wang, J., & Liebig, J. (2010). Genomic Comparison of the Ants Camponotus floridanus and Harpegnathos saltator. Science, 329(5995), 1068–1071. https://doi.org/10.1126/science.1192428 (PubMed:20798317)
Accessions (data included in GigaDB):
GENBANK: AEAB00000000
BioProject: PRJNA50201
Accessions (data not in GigaDB):
Click on a table column to sort the results.
Table SettingsSample ID | Common Name | Scientific Name | Sample Attributes | Taxonomic ID | Genbank Name |
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Cflo | Florida carpenter ant | Camponotus floridanus | 104421 | Florida carpenter ant |
Click on a table column to sort the results.
Table SettingsFile Name | Description | Sample ID | Data Type | File Format | Size | Release Date | File Attributes | Download |
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Readme | TEXT | 238 B | 2011-11-12 | MD5 checksum: ee38f19339b046a26c2782389ad0eee4 |
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Sequence assembly | FASTA | 64.99 MB | 2011-11-12 | MD5 checksum: cc5899c54f2935383ed659209f61bc9b |
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Annotation | GFF | 1.16 MB | 2011-11-12 | MD5 checksum: 2b29d2561929c56ea30a8788abb1d4c7 |
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Coding sequence | FASTA | 6.72 MB | 2011-11-12 | MD5 checksum: f471a30ad4e271293a2a740a0277ee57 |
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Protein sequence | FASTA | 4.36 MB | 2011-11-12 | MD5 checksum: df6484806c582c17239cab646843216f |
Date | Action |
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October 22, 2015 | File Cflo.v3.3.cds.gz updated |