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Genome data from the Florida carpenter ant (Camponotus floridanus).

Dataset type: Genomic
Data released on November 12, 2011

Bonasio R; Zhang G; Ye C; Mutti NS; Fang X; Qin N; Donahue G; Yang P; Li Q; Li C; Zhang P; Huang Z; Berger SL; Reinberg D; Wang J; Liebig J (2011): Genome data from the Florida carpenter ant (Camponotus floridanus). GigaScience. https://doi.org/10.5524/100018

DOI10.5524/100018

Here we present the sequenced genome of the Florida carpenter ant (Camponotus floridanus), a species with an organized caste society. As an eusocial species, its genome offers interesting insights into aging, epigenetics and animal behavior. The Illumina Genome Analyzer platform was used to sequence a genomic library of the Florida carpenter ant, obtaining more than 100-fold coverage. The draft genomic assembly reached a scaffold N50 size of ~600 Kb and covers more than 90% of the approximately 240 Mb genome.

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Additional details

Read the peer-reviewed publication(s):

  • Bonasio, R., Zhang, G., Ye, C., Mutti, N. S., Fang, X., Qin, N., Donahue, G., Yang, P., Li, Q., Li, C., Zhang, P., Huang, Z., Berger, S. L., Reinberg, D., Wang, J., & Liebig, J. (2010). Genomic Comparison of the Ants Camponotus floridanus and Harpegnathos saltator. Science, 329(5995), 1068–1071. https://doi.org/10.1126/science.1192428 (PubMed:20798317)

Accessions (data included in GigaDB):

GENBANK: AEAB00000000
BioProject: PRJNA50201

Accessions (data not in GigaDB):

SRA: SRP002786
GEO: GSE22680

Click on a table column to sort the results.

Table Settings
Sample ID Common Name Scientific Name Sample Attributes Taxonomic ID Genbank Name
Cflo Florida carpenter ant Camponotus floridanus 104421 Florida carpenter ant

Click on a table column to sort the results.

Table Settings

File Name Description Sample ID Data Type File Format Size Release Date File Attributes Download
Readme TEXT 238 B 2011-11-12 MD5 checksum: ee38f19339b046a26c2782389ad0eee4
Sequence assembly FASTA 64.99 MB 2011-11-12 MD5 checksum: cc5899c54f2935383ed659209f61bc9b
Annotation GFF 1.16 MB 2011-11-12 MD5 checksum: 2b29d2561929c56ea30a8788abb1d4c7
Coding sequence FASTA 6.72 MB 2011-11-12 MD5 checksum: f471a30ad4e271293a2a740a0277ee57
Protein sequence FASTA 4.36 MB 2011-11-12 MD5 checksum: df6484806c582c17239cab646843216f
Date Action
October 22, 2015 File Cflo.v3.3.cds.gz updated