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3D graphical visualization of the genetic architectures underlying complex traits in multiple environments

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Abstract

An approach for generating interactive 3D graphical visualization of the genetic architectures of complex traits in multiple environments is described. 3D graphical visualization is utilized for making improvements on traditional plots in quantitative trait locus (QTL) mapping analysis. Interactive 3D graphical visualization for abstract expression of QTL, epistasis and their environmental interactions for experimental populations was developed in framework of user-friendly software QTLNetwork (http://ibi.zju.edu.cn/software/qtlnetwork). Novel definition of graphical meta system and computation of virtual coordinates are used to achieve explicit but meaningful visualization. Interactive 3D graphical visualization for QTL analysis provides geneticists and breeders a powerful and easy-to-use tool to analyze and publish their research results.

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Correspondence to Ye Xiu-zi.

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Project supported by the National Natural Science Foundation of China (Nos. 60473106, 60273060 and 60333010), and the Ph.D. Programs Foundation of Ministry of Education, China (Nos. 20030335064 and 20060335114)

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Hu, Cc., Ye, Xz., Zhang, Y. et al. 3D graphical visualization of the genetic architectures underlying complex traits in multiple environments. J. Zhejiang Univ. - Sci. A 8, 563–567 (2007). https://doi.org/10.1631/jzus.2007.A0563

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  • DOI: https://doi.org/10.1631/jzus.2007.A0563

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