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Licensed Unlicensed Requires Authentication Published by De Gruyter May 24, 2013

Genetic diagnosis of one family with incomplete clinical data

  • Shiyan Xu , Sirsingh H. Bhajoo and Weiying Jiang EMAIL logo

Abstract

A 6-day-old female patient suddenly died of congestive heart failure, hepatomegaly and hypoglycemic encephalopathy. Tandem mass spectrometry (MS) analysis revealed a possibility of carnitine deficiency. However, many of the clinical symptoms had not yet occurred at that time, and the clinical data was incomplete. We aim to derive a systematic procedure of identifying pathogenic mutations for similar patients. Physicians could save patients’ lives with effective treatment at a much earlier stage. Direct sequencing of the exons and exon–intron boundaries of GAA, SLC25A5, CPT1, CPT2, SLC25A20 and MUT genes were performed on the parents of the patient. DNA from the blood spots of the patient was analyzed for the MUT gene. The results revealed that the patient was a compound heterozygote with MUT. c. 729_730insTT and c. 1677-1G>A. cDNA sequence demonstrated MUT c. 1677-1G>A resulting in the deletion of eight nucleotides and the introduction of 13 novel amino acids before premature termination.


Corresponding author: Professor Weiying Jiang, Acting Head, Department of Medical Genetics, 12010 N. Medical Science and Technology Building Zhongshan School of Medicine, Sun Yat-sen University No. 74, Zhongshan No. 2 Road Guangzhou City, Guangdong Province 510080, China, Phone: +(86) 20-87331928, Fax: +(86) 20-87331928, E-mail:

We extend our warm thanks to the patient and relatives, for kindly donating both their time and biological samples to our genetic studies. We also thank the doctors who have provided us with the patient’s information. WYJ was supported by the Chinese National Natural Scientific Grants (No. 31171214 and U1132606).

References

1. Pons R, De Vivo DC. Primary and secondary carnitine deficiency syndromes. J Child Neurol 1995;10(Suppl 2):S8–24.10.1177/0883073895010002S03Search in Google Scholar

2. Wang F, Han L, Yang Y, Gu X, Ye J, et al. Clinical, biochemical, and molecular analysis of combined methylmalonic acidemia and hyperhomocysteinemia (cblC type) in China 2010. J Inherit Metab Dis 2010;Oct 6 [Epub ahead of print].10.1007/s10545-010-9217-0Search in Google Scholar

3. Koizumi A, Nozaki J, Ohura T, Kayo T, Wada Y, et al. Genetic epidemiology of the carnitine transporter OCTN2 gene in a Japanese population and phenotypic characterization in Japanese pedigrees with primary systemic carnitine deficiency. Hum Mol Genet 1999;8:2247–54.10.1093/hmg/8.12.2247Search in Google Scholar

4. Shibbani K, Fahed AC, Al-Shaar L, Arabi M, Nemer G, et al. Primary Carnitine Deficiency: Novel mutations and insights into the cardiac phenotype. Clin Genet 2013;Feb 4 [Epub ahead of print].10.1111/cge.12112Search in Google Scholar

5. Scaglia F, Longo N. Primary and secondary alterations of neonatal carnitine metabolism. Semin Perinatol 1999;23:152–61.10.1016/S0146-0005(99)80047-0Search in Google Scholar

6. Frazier DM, Millington DS, McCandless SE, Koeberl DD, Weavil SD, et al. The tandem mass spectrometry newborn screening experience in North Carolina: 1997–2005. J Inherit Metab Dis 2006;29:76–85.10.1007/s10545-006-0228-9Search in Google Scholar PubMed

7. Dietzen DJ, Rinaldo P, Whitley RJ, Rhead WJ, Hannon WH, et al. National academy of clinical biochemistry laboratory medicine practice guidelines: follow-up testing for metabolic disease identified by expanded newborn screening using tandem mass spectrometry; executive summary. Clin Chem 2009;55:1615–26.10.1373/clinchem.2009.131300Search in Google Scholar PubMed

8. Oba-Shinjo SM, Da SR, Andrade FG, Palmer RE, Pomponio RJ, et al. Pompe disease in a Brazilian series: clinical and molecular analyses with identification of nine new mutations. J Neurol 2009;256:1881–90.10.1007/s00415-009-5219-ySearch in Google Scholar PubMed

9. Feng Y, Zheng P, Zhao H, Wu K. SLC22A4 and SLC22A5 gene polymorphisms and Crohn’s disease in the Chinese Han population. J Dig Dis 2009;10:181–7.10.1111/j.1751-2980.2009.00383.xSearch in Google Scholar PubMed

10. Bennett MJ, Boriack RL, Narayan S, Rutledge SL, Raff ML. Novel mutations in CPT 1A define molecular heterogeneity of hepatic carnitine palmitoyltransferase I deficiency. Mol Genet Metab 2004;82:59–63.10.1016/j.ymgme.2004.02.004Search in Google Scholar PubMed

11. Taggart RT, Smail D, Apolito C, Vladutiu GD. Novel mutations associated with carnitine palmitoyltransferase II deficiency. Hum Mutat 1999;13:210–20.10.1002/(SICI)1098-1004(1999)13:3<210::AID-HUMU5>3.0.CO;2-0Search in Google Scholar

12. Costa C, Costa JM, Slama A, Boutron A, Vequaud C, et al. Mutational spectrum and DNA-based prenatal diagnosis in carnitine-acylcarnitine translocase deficiency. Mol Genet Metab 2003;78:68–73.10.1016/S1096-7192(02)00205-6Search in Google Scholar

13. Sakamoto O, Ohura T, Matsubara Y, Takayanagi M, Tsuchiya S. Mutation and haplotype analyses of the MUT gene in Japanese patients with methylmalonic acidemia. J Hum Genet 2007;52:48–55.10.1007/s10038-006-0077-2Search in Google Scholar

14. Martinez MA, Rincon A, Desviat LR, Merinero B, Ugarte M, et al. Genetic analysis of three genes causing isolated methylmalonic acidemia: identification of 21 novel allelic variants. Mol Genet Metab 2005;84:317–25.10.1016/j.ymgme.2004.11.011Search in Google Scholar

15. Fowler B, Leonard JV, Baumgartner MR. Causes of and diagnostic approach to methylmalonic acidurias. J Inherit Metab Dis. 2008;31:350–60.10.1007/s10545-008-0839-4Search in Google Scholar

Received: 2013-1-23
Accepted: 2013-4-22
Published Online: 2013-05-24
Published in Print: 2013-10-01

©2013 by Walter de Gruyter Berlin Boston

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