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CaSPIAN: A Causal Compressive Sensing Algorithm for Discovering Directed Interactions in Gene Networks

Figure 2

A gene regulatory network of HeLa cell genes, reconstructed using different causal inference algorithms.

Solid arrows denote true-positives and dashed arrows denote false-positives. True-negatives and false-negatives are not depicted in the figures to avoid cluttering; however, they can be easily obtained by comparing the known regulatory network and the inferred network. Precision is denoted by , sensitivity by , accuracy by and the -measure by .

Figure 2

doi: https://doi.org/10.1371/journal.pone.0090781.g002