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A Global Genome Segmentation Method for Exploration of Epigenetic Patterns

Figure 2

SOM-properties after ES-segmentation.

a) The population map shows the number of EPs per node. It is logarithmically scaled and ranges from 0 (blue) to 150.000 (red). b) CEP cluster map. Islands with more than 10 EPs per node are shown in white and are labeled with their CEP. Borderlines with less than 10 EPs per node are shown in black. EPs with the same CEP cluster together in one island, except for ES110, ES010 and ES011 which split into two separated islands each (postfixes a,b). Colored are islands of active chromatin (ES100, green) and poised chromatin (ES110a,b, yellow).

Figure 2

doi: https://doi.org/10.1371/journal.pone.0046811.g002