Genotype-Based Test in Mapping Cis-Regulatory Variants from Allele-Specific Expression Data
Figure 6
Comparison of log(1/p) values obtained before and after rephasing with PHASE.
Simulations at r frequency of ∼0.35 (i.e. around 23 AI individuals out of a total of 50) were used and results were separated according to the rephasing quality evaluated as (A) zero, (B) one, (C) two and (D) three or more, AI individuals with phase switch error.