Phylogeography and Taxonomy of Trypanosoma brucei
Figure 3
Maximum parsimony haplotype networks showing genealogical relationships among Trypanosoma brucei kinetoplast haplotypes. Panel A highlights the relationships among lineages of T. b. brucei, T. b. rhodesiense, T. b. gambiense group 1 and T. b. gambiense group 2 (color-coded). Circles are sized proportional to the frequency with which a particular haplotype was recovered. Numbers in the circles correspond to haplotype ID. Empty circles indicate haplotypes that are inferred to exist but were not sampled. Red numbers next to haplotypes containing T. b. rhodesiense indicate the SRA types of the included T. b. rhodesiense isolates (1, SRA type 1; 2, SRA type 2; +, SRA type not known). The light blue boxes correspond to the clades defined in Figure 2. Panel B shows the geographic range of each haplotype.