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Research Note

Strigolactone GR24 upregulates Nrf2 target genes and may protect against oxidative stress in skeletal muscle

[version 1; peer review: 2 approved with reservations]
PUBLISHED 13 Sep 2018
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Abstract

GR24 is a synthetic strigolactone analog, demonstrated to regulate the development of plants and arbuscular mycorrhizal fungi. GR24 possesses anti-cancer and anti-apoptotic properties, enhances insulin sensitivity and mitochondrial biogenesis in skeletal myotubes, inhibits adipogenesis, decreases inflammation in adipocytes and macrophages and downregulates the expression of hepatic gluconeogenic enzymes. Transcription factor Nrf2 (Nuclear factor (erythroid-derived 2)-like 2) is a master regulator of antioxidant response, regulating a multitude of genes involved in cellular stress responses and anti-inflammatory pathways, thus maintaining cellular redox homeostasis. Nrf2 activation reduces the deleterious effects of mitochondrial toxins and has multiple roles in promoting mitochondrial function and dynamics. We studied the role of GR24 on gene expression in rat L6 skeletal muscle cells which were differentiated into myotubes. The myotubes were treated with GR24 and analyzed by microarray gene expression profiling. GR24 upregulated the cytoprotective transcription factor Nrf2 and its target genes, activating antioxidant defences, suggesting that GR24 may protect skeletal muscle from the toxic effects of oxidative stress.

Keywords

Strigolactone, GR24, Nrf2, Oxidative stress, Microarray

Introduction

Strigolactones are carotenoid-derived phytohormones with endogenous roles in regulating plant growth and exogenous roles in establishing symbiosis of host plant with arbuscular mycorrhizal fungi1. Strigolactones induce beneficial effects in mycorrhiza, such as mitochondrial biogenesis and ATP production24. The anti-cancer properties58 and anti-inflammatory potential9 of strigolactones have recently been investigated in mammalian cells. The positive effects of strigolactone analog GR24 in enhancing insulin sensitivity, mitochondrial function and inhibiting adipogenesis and inflammation in insulin-sensitive cells have also been demonstrated10,11.

Nrf2 (Nuclear factor (erythroid-derived 2)-like 2) activates gene transcription by binding to the antioxidant response element (ARE) in the promoters of its target genes. It regulates multiple biological functions ranging from cellular redox metabolism, detoxification, heme, lipid and glucose metabolism, NADPH generation, autophagy, apoptosis, xenobiotic stress reponse to inflammation by interacting with its target genes, regulating an extensive antioxidant protein network. Nrf2 is associated with disease pathologies like cancer12, hepatotoxicity13, cardiovascular disease14 and neurodegenerative diseases15.

Mitochondria are the major sites of reactive oxygen species (ROS) production and also the targets of their toxic effects. Mitochondrial dysfunction has been associated with the development of insulin resistance, and diabetes is known to induce oxidative stress through the overproduction of ROS and ROS-induced DNA damage16. Nrf2 activation defends against mitochondrial toxins and ROS and affects mitochondrial function by regulating mitochondrial biogenesis, mitochondrial fatty acid oxidation, respiration, ATP production and mitochondrial dynamics17. With its versatile protective mechanism against oxidative stress, pancreatic β-cell apoptosis and insulin resistance, Nrf2 has become a promising therapeutic target for the treatment of type 2 diabetes18.

We have demonstrated that GR24 ameliorates insulin sensitivity, stimulates mitochondrial biogenesis and ATP production and upregulates genes regulating mitochondrial function in L6 myotubes10. Very recently, the efficacy of GR24 in promoting cytoprotective responses via Nrf2 activation was reported in hepatic and macrophage cell lines19. This work reports a transcriptomic study revealing the potential beneficial effects of GR24 in upregulating Nrf2 and its target genes involved in detoxification, carbohydrate and lipid metabolism, heme metabolism, NADPH regeneration and oxidative stress in L6 myotubes, thus contributing to metabolic homeostasis.

Methods

Results from the methods described in this study have been published previously10, although the analyses described here are published for the first time.

Cell culture and differentiation

Rat L6 myoblasts (ATCC, Manassas, VA, USA) were maintained in Dulbecco’s modified Eagle’s medium (DMEM 4.5 g/l glucose, Lonza, Basel, Switzerland) supplemented with 10% FBS (Hyclone, Pasching, Austria), 2 mM L-glutamine (Lonza) and 1% penicillin/streptomycin (Lonza) at +37°C in a humidified atmosphere of 5% CO2. The cells were seeded in multiwell plates at 2 × 104 cells/cm2 one day before starting the differentiation. Myoblasts were differentiated into myotubes by switching into α-MEM media (Gibco, Paisley, UK) supplemented with 2% horse serum (Gibco) and 1% penicillin/streptomycin. GR24 (3E,3aR,8bS)-3-[[(2 S)-4-methyl-5-oxo-2H-furan-2-yl] oxymethylidene]-4,8b-dihydro-3aH-indeno[1,2-b]furan-2-one, Chiralix, Nijmegen, Netherlands) was dissolved in DMSO. The control samples had equivalent DMSO concentration.

Microarray sample preparation

L6 myotubes were treated with 60 µM GR24 at 7 days of differentiation for 24 h in three independent experiments, resulting in three replicate microarrays in each treatment group. Total RNAs were extracted with RNeasy Mini kit (Qiagen, Hilden, Germany) and RNA quality was assessed with the Agilent Bioanalyzer 2100 (Agilent Technologies, Espoo, Finland). Total RNA (200 ng) was converted to cDNA with Agilent AffinityScript RNase Block, labelled according to manufacturer’s instructions and purified using RNeasy mini spin columns (Qiagen). RNA Spike-In Kit (Exiqon, Vedbaek, Denmark) was used to monitor the success of labelling. Samples were then mixed with blocking agent, fragmentation and hybridization buffer, and were hybridized to Agilent SurePrint G3 Rat GE 8×60 K Microarrays for 17 h at 65°C before washing and scanning with Agilent Scanner G2505C using manufacturer’s protocols. Agilent Feature Extraction software was used to extract data from raw microarray image files10.

Microarray data processing

The data was processed with limma package (version 3.28.21) of the Bioconductor software20. Microarray data are MIAME compliant. Differentially expressed transcripts were analysed by Bayes moderated t-statistics followed by the Benjamini-Hochberg correction method to control false discovery rate (FDR) with significance threshold set at p < 0.0520,21.

Results and discussion

The top 5 GR24-upregulated genes (glutathione S-transferase alpha 1, metallothionein 1M, heme oxygenase 1, glutathione S-transferase alpha 2, and sequestosome 1) were found to be known targets of Nrf2 (Table 1). As the prototypical Nrf2 target gene NAD(P)H quinone dehydrogenase 1 (Nqo1) was also found high on the list, it was compelling to look into the extensive list of Nrf2 target genes. We found 56 known Nrf2 target genes22, including Nrf2 itself, to be upregulated by GR24 treatment (Table 1). Prior to our study, the effects of strigolactones treatment on the mammalian cell transcriptome have only been investigated in human osteosarcoma cells, where strigolactone analogs mainly upregulated the heat shock stress proteins and downregulated the cell cycle5.

Table 1. Selected upregulated Nrf2 target genes in L6 myotubes after 24 h treatment with 60 µM GR24.

Gene symbolDescriptionAccessionlogFCFold changeAdjusted P value
Detoxication: Phase I drug oxidation, reduction and hydrolysis
Adh7 Alcohol dehydrogenase 7NM_1343291.6043.041.746E-09
Akr1b1Aldo-keto reductase family 1 member B1NM_0124981.8313.567.986E-09
Akr1b8 Aldo-keto reductase family 1. member B8NM_1731362.5035.671.254E-10
Akr1cl Aldo-keto reductase family 1. member C-likeNM_0011099000.6851.617.675E-06
Cbr1 Carbonyl reductase 1NM_0191701.0602.083.055E-08
Nqo1 NAD(P)H quinone dehydrogenase 1NM_0170003.1448.841.602E-10
Ptgr1 Prostaglandin reductase 1NM_1388633.2339.401.196E-09
Detoxication: Phase II drug conjugation
Gsta1 Glutathione S-transferase alpha 1NM_0315094.61024.423.458E-11
Gsta2 Glutathione S-transferase alpha 2NM_0010109213.67612.781.348E-09
Gstm1 Glutathione S-transferase mu 1NM_0170140.7071.637.461E-06
Gstp1 Glutathione S-transferase pi 1NM_0125772.4985.653.862E-10
Mgst1 Microsomal glutathione S-transferase 1NM_1343492.3275.021.638E-09
Ugt1a2 UDP glucuronosyltransferase 1 family. polypeptide A2NM_0010396910.1691.123.123E-02
Detoxication: Phase III drug transport
Abcb6 ATP binding cassette subfamily B member 6NM_0805820.1941.146.514E-03
Abcc1 ATP binding cassette subfamily C member 1NM_0222811.4202.682.985E-07
Abcc2 ATP binding cassette subfamily C member 2NM_0128330.6531.572.263E-03
Abcc4 ATP binding cassette subfamily C member 4NM_1334111.3672.584.359E-07
Abcc5 ATP binding cassette subfamily C member 5NM_0539240.8071.754.986E-06
Antioxidant systems
Cat CatalaseNM_0125202.2054.617.440E-09
Gclc Glutamate-cysteine ligase, catalytic subunitNM_0128151.2312.352.616E-07
Ggt1 Gamma-glutamyltransferase 1NM_0538402.5906.026.774E-09
Glrx GlutaredoxinNM_0222780.7171.649.108E-05
Gls GlutaminaseNM_0125691.7823.442.165E-09
Gpx4 Glutathione peroxidase 4NM_0010398490.4511.371.766E-05
Prdx1 Peroxiredoxin 1NM_0571141.3612.571.274E-06
Prdx6 Peroxiredoxin 6NM_0535761.2912.459.933E-06
Slc6a9 Solute carrier family 6 member 9 (glycine transporter)NM_0538182.2834.879.548E-10
Slc7a11 Solute carrier family 7 member 11 (cystine/glutamate transporter)NM_0011076730.8701.835.449E-06
Sod1 Superoxide dismutase 1NM_0170500.9391.922.031E-06
Srxn1 Sulfiredoxin 1NM_0010478582.3305.037.817E-10
Txn1 ThioredoxinNM_0538001.7123.284.093E-09
Txnrd1 Thioredoxin reductase 1NM_0316142.1934.571.765E-08
Carbohydrate metabolism and NADPH regeneration
G6pd Glucose-6-phosphate dehydrogenaseNM_0170062.1844.547.894E-09
Idh1 Isocitrate dehydrogenase 1NM_0315101.0962.144.304E-08
Me1 Malic enzyme 1NM_0126000.8601.818.162E-08
Pgd Phosphogluconate dehydrogenaseNM_0013054351.9203.791.503E-09
Taldo1 Transaldolase 1NM_0318111.1502.222.143E-07
Tkt TransketolaseNM_0225920.9891.992.321E-06
Ugdh UDP-glucose 6-dehydrogenaseNM_0313250.6231.542.451E-05
Lipid metabolism
Acot7 Acyl-coa thioesterase 7NM_0011460610.8521.806.273E-07
Acox1 Acyl-coa oxidase 1NM_0173400.7061.631.897E-05
Ces1a Carboxylesterase 1ANM_0011903751.1322.197.021E-05
Pnpla2 Patatin-like phospholipase domain-containing 2NM_0011085090.4241.347.480E-05
Heme and iron metabolism
Blvra Biliverdin reductase ANM_0538500.8901.851.973E-06
Blvrb Biliverdin reductase BNM_0011062361.4972.825.723E-09
Fech FerrochelataseNM_0011084341.4312.705.570E-09
Fth1 Ferritin heavy chain 1NM_0128480.8771.844.826E-07
Ftl1 Ferritin light chain 1NM_0225001.0172.023.213E-07
Hmox1 Heme oxygenase 1NM_0125803.95915.551.136E-10
Transcription factors and associated proteins
Ahr Aryl hydrocarbon receptorNM_0131490.8671.821.519E-06
Cebpb CCAAT/enhancer binding protein betaNM_0013017150.9591.941.102E-06
Mafg Mafg proteinNM_0223860.7181.642.006E-05
Mt1m Metallothionein 1MNM_0011375644.00916.107.970E-10
Nfe2l2 Nuclear factor, erythroid 2-like 2 (Nrf2)NM_0317890.6591.583.116E-05
Rxra Retinoid X receptor alphaNM_0128050.7881.731.677E-05
Sqstm1 Sequestosome 1NM_1815503.57611.933.458E-11
Ubiquitin ligase substrate adaptor
Keap1 Kelch-like ECH-associated protein 1NM_0571521.2692.413.765E-08

Activation of Nrf2 signaling is known to have beneficial effects in cancer, metabolic syndrome, obesity, nephropathy, retinopathy, neuropathy, and β-cell protection. Nrf2 regulates the transcription of genes involved in antioxidant, detoxification and metabolic processes23. In our study, GR24 enhanced the expression of the Nrf2-dependent antioxidant genes Nqo1 and heme oxygenase 1, which are known to block inflammatory pathways24. GR24 has recently been shown to alleviate inflammation and upregulate these two NRF2 target genes in hepatic and macrophage cells19.

Glutathione and associated enzymes form an important antioxidant defence system. Treatment with GR24 was found to increase root glutathione content in plants25, but there are no previous reports on the effects of strigolactones on the glutathione system in mammalian cells. Our results show that GR24 treatment upregulated glutamate-cysteine ligase, the rate-limiting enzyme in glutathione synthesis (Table 1). Many components of the glutathione system are upregulated by Nrf2, and the elevations in the expression of glutaredoxin, glutathione peroxidase 4 and several glutathione S-transferases in GR24-treated cells were evident in our results (Table 1).

Conclusions

GR24 upregulated the cytoprotective transcription factor Nrf2 and its target genes, which are involved in detoxification, antioxidant systems, carbohydrate and lipid metabolism, heme and iron metabolism, NADPH regeneration and regulation of transcription in L6 myotubes. The ability of GR24 to enhance key cellular defence mechanisms through the activation of Nrf2 signaling may beneficially protect cells from oxidative stress and inflammation, and may alleviate the complications associated with metabolic syndrome.

Data availability

Microarray raw data have been deposited in the NCBI Gene Expression Omnibus (GEO), accession number GSE90833: https://identifiers.org/geo/GSE90833.

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Modi SR and Kokkola T. Strigolactone GR24 upregulates Nrf2 target genes and may protect against oxidative stress in skeletal muscle [version 1; peer review: 2 approved with reservations] F1000Research 2018, 7:1459 (https://doi.org/10.12688/f1000research.16172.1)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
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ApprovedThe paper is scientifically sound in its current form and only minor, if any, improvements are suggested
Approved with reservations A number of small changes, sometimes more significant revisions are required to address specific details and improve the papers academic merit.
Not approvedFundamental flaws in the paper seriously undermine the findings and conclusions
Version 1
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Reviewer Report 31 Oct 2018
Tugba Boyunegmez Tumer, Department of Molecular Biology and Genetics, Çanakkale Onsekiz Mart University, Çanakkale, Turkey 
Approved with Reservations
VIEWS 19
In current research note, a microarray study was carried out to analyze the effect of GR24, a synthetic strigolactone analog, on the gene expression profile of rat L6 myotubes. 60 µM of GR24 was used to treat L6 myotubes at ... Continue reading
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CITE
HOW TO CITE THIS REPORT
Tumer TB. Reviewer Report For: Strigolactone GR24 upregulates Nrf2 target genes and may protect against oxidative stress in skeletal muscle [version 1; peer review: 2 approved with reservations]. F1000Research 2018, 7:1459 (https://doi.org/10.5256/f1000research.17660.r39708)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
  • Author Response 14 Nov 2018
    SHALEM RAJU MODI, Department of Internal Medicine, Institute of Clinical Medicine, University of Eastern Finland, Kuopio, 70210, Finland
    14 Nov 2018
    Author Response
    We thank the referee for kindly evaluating our research note and for the valid comments and suggestions. We agree with the comments and hence, we changed the discussion part and ... Continue reading
COMMENTS ON THIS REPORT
  • Author Response 14 Nov 2018
    SHALEM RAJU MODI, Department of Internal Medicine, Institute of Clinical Medicine, University of Eastern Finland, Kuopio, 70210, Finland
    14 Nov 2018
    Author Response
    We thank the referee for kindly evaluating our research note and for the valid comments and suggestions. We agree with the comments and hence, we changed the discussion part and ... Continue reading
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24
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Reviewer Report 02 Oct 2018
David A. Hood, Muscle Health Research Centre, School of Kinesiology and Health Science, York University, Toronto, ON, Canada 
Approved with Reservations
VIEWS 24
Interesting investigation of the effect of a plant-based compound to change gene expression in muscle cells, however the study is very limited in scope.

1.  All reported data show increases in mRNA. Are there no significant decreases ... Continue reading
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HOW TO CITE THIS REPORT
Hood DA. Reviewer Report For: Strigolactone GR24 upregulates Nrf2 target genes and may protect against oxidative stress in skeletal muscle [version 1; peer review: 2 approved with reservations]. F1000Research 2018, 7:1459 (https://doi.org/10.5256/f1000research.17660.r38815)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
  • Author Response 14 Nov 2018
    SHALEM RAJU MODI, Department of Internal Medicine, Institute of Clinical Medicine, University of Eastern Finland, Kuopio, 70210, Finland
    14 Nov 2018
    Author Response
    We thank the referee for carefully evaluating our research note. He has correctly identified that the study has its limitations. As we have been engaged in other studies and have ... Continue reading
COMMENTS ON THIS REPORT
  • Author Response 14 Nov 2018
    SHALEM RAJU MODI, Department of Internal Medicine, Institute of Clinical Medicine, University of Eastern Finland, Kuopio, 70210, Finland
    14 Nov 2018
    Author Response
    We thank the referee for carefully evaluating our research note. He has correctly identified that the study has its limitations. As we have been engaged in other studies and have ... Continue reading

Comments on this article Comments (0)

Version 2
VERSION 2 PUBLISHED 13 Sep 2018
Comment
Alongside their report, reviewers assign a status to the article:
Approved - the paper is scientifically sound in its current form and only minor, if any, improvements are suggested
Approved with reservations - A number of small changes, sometimes more significant revisions are required to address specific details and improve the papers academic merit.
Not approved - fundamental flaws in the paper seriously undermine the findings and conclusions
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