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Human Cancer Biology |
B Signature of Inflammatory Breast Cancer by cDNA Microarray Validated by Quantitative Real-time Reverse Transcription-PCR, Immunohistochemistry, and Nuclear Factor-
B DNA-Binding
Authors' Affiliations: 1 Translational Cancer Research Group (Laboratory of Pathology, University of Antwerp and Oncology Center, General Hospital Sint-Augustinus); 2 Department of Epidemiology and Social Medicine, University of Antwerp, Wilrijk, Belgium; and 3 Cancer Research UK Growth Factor Group, Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, Oxford, United Kingdom
Requests for reprints: Peter B. Vermeulen, Department Pathology-AZ Sint-Augustinus, Oosterveldlaan 24, B2610 Wilrijk, Belgium. Phone: 323-443-52-39; Fax: 323-443-30-36; E-mail: Peter.Vermeulen{at}GVAgroup.be.
Purpose: Inflammatory breast cancer (IBC) is the most aggressive form of locally advanced breast cancer with high metastatic potential. In a previous study, we showed that IBC is a different form of breast cancer compared with non-IBC by cDNA microarray analysis. A list of 756 genes with significant expression differences between IBC and non-IBC was identified. In-depth functional analysis revealed the presence of a high number of nuclear factor-
B (NF-
B) target genes with elevated expression in IBC versus non-IBC. This led to the hypothesis that NF-
B contributes to the phenotype of IBC. The aim of the present study was to further investigate the role of NF-
B in IBC.
Experimental Design: Immunohistochemistry and NF-
B DNA-binding experiments were done for all NF-
B subunits (RelA, RelB, cRel, NFkB1, and NFkB2) using IBC and non-IBC specimens. Transcriptionally active NF-
B dimers were identified by means of coexpression analysis. In addition, quantitative real-time reverse transcription-PCR for eight NF-
B target genes, selected upon a significant, 3-fold gene expression difference between IBC and non-IBC by cDNA microarray analysis, was done.
Results: We found a significant overexpression for all of eight selected NF-
B target genes in IBC compared with non-IBC by quantitative real-time reverse transcription-PCR. In addition, we found a statistically elevated number of immunostained nuclei in IBC compared with non-IBC for RelB (P = 0.038) and NFkB1 (P < 0.001). Immunohistochemical data were further validated by NF-
B DNA-binding experiments. Significant correlations between immunohistochemical data and NF-
B DNA binding for RelA, RelB, NFkB1, and NFkB2 were found. Transcriptionally active NF-
B dimers, composed of specific combinations of NF-
B family members, were found in 19 of 44 IBC specimens compared with 2 of 45 non-IBC specimens (P < 0.001). In addition, we found evidence for an estrogen receptor (ER)mediated inhibition of the NF-
B signaling pathway. NF-
B target genes were significantly elevated in ER versus ER+ breast tumors. Also, the amount of immunostained nuclei for RelB (P = 0.025) and NFkB1 (P = 0.031) was higher in ER breast tumors versus ER+ breast tumors.
Conclusions: The NF-
B transcription factor pathway probably contributes to the phenotype of IBC and possibly offers new options for treatment of patients diagnosed with this aggressive form of breast cancer.
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