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Hierarchical Clustering of Corals using Image Clustering

Published:31 January 2022Publication History

ABSTRACT

Several approaches have been taken by different scientists over the years to create taxonomy of coral species by looking at their morphology. On molecular examination, the taxonomies created have revealed to have incorrect classifications. In this project we aim to find a relationship between different types of corals and classify them by using image classification and clustering techniques on a coral dataset provided by Queensland Museum (QM), Australia. We use the VGG16 [9], InceptionV3 [10] and DenseNet [5] models which are pretrained on the ImageNet dataset, to train and extract feature embeddings from the coral images in the QM dataset. These embeddings are then clustered using the Agglomerative Hierarchical Clustering to obtain a general hierarchy of corals. We show that DenseNet performs the best among the three models on the image classification task and can be used to extract the feature embeddings. Using Agglomerative Hierarchical Clustering with average link criterion on these embeddings, we can generate a general hierarchy of corals.

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  • Published in

    cover image ACM Other conferences
    ADCS '21: Proceedings of the 25th Australasian Document Computing Symposium
    December 2021
    61 pages
    ISBN:9781450395991
    DOI:10.1145/3503516

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    • Published: 31 January 2022

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