Orientational phase transitions and the assembly of viral capsids

Sanjay Dharmavaram, Fangming Xie, William Klug, Joseph Rudnick, and Robijn Bruinsma
Phys. Rev. E 95, 062402 – Published 6 June 2017

Abstract

We present a Landau theory for large-l orientational phase transitions and apply it to the assembly of icosahedral viral capsids. The theory predicts two distinct types of ordering transitions. Transitions dominated by the l=6,10,12, and 18 icosahedral spherical harmonics resemble robust first-order phase transitions that are not significantly affected by chirality. The remaining transitions depend essentially on including mixed l states denoted as l=15+16 corresponding to a mixture of l=15 and l=16 spherical harmonics. The l=15+16 transition is either continuous or weakly first-order and it is strongly influenced by chirality, which suppresses spontaneous chiral symmetry breaking. The icosahedral state is in close competition with states that have tetrahedral, D5, and octahedral symmetries. We present a group-theoretic method to analyze the competition between the different symmetries. The theory is applied to a variety of viral shells.

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  • Received 18 January 2017

DOI:https://doi.org/10.1103/PhysRevE.95.062402

©2017 American Physical Society

Physics Subject Headings (PhySH)

Physics of Living SystemsCondensed Matter, Materials & Applied PhysicsPolymers & Soft Matter

Authors & Affiliations

Sanjay Dharmavaram1, Fangming Xie2, William Klug3, Joseph Rudnick1, and Robijn Bruinsma1

  • 1Department of Physics and Astronomy, University of California, Los Angeles, California 90095, USA
  • 2Department of Physics, University of Science and Technology of China, Hefei, Anhui, China
  • 3Department of Mechanical and Aerospace Engineering, University of California, Los Angeles, California 90095, USA

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Issue

Vol. 95, Iss. 6 — June 2017

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