1887

Abstract

A Gram-stain-positive, rod-shaped, non-endospore-forming, orange-pigmented (coloured) actinobacterium (01-Je-003) was isolated from the wall of an indoor environment primarily colonized with moulds. On the basis of 16S rRNA gene sequence similarity studies, strain 01-Je-003 was shown to belong to the genus and was most similar to the type strains of (98.8 % similarity), (97.3 %) and (97.2 %). Chemotaxonomic data [predominant quinone menaquinone MK-8(H); polar lipid profile consisting of major compounds diphosphatidylglycerol, phosphatidylglycerol and an unidentified glycolipid; characteristic cell-wall diamino acid -diaminopimelic acid; polyamine pattern showing major compounds putrescine and cadaverine; major fatty acids anteiso-C and anteiso-C] supported the affiliation of strain 01-Je-003 to the genus . The results of DNA–DNA hybridizations and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain 01-Je-003 from the two most closely related species, and . Strain 01-Je-003 therefore represents a novel species, for which the name sp. nov. is proposed, with the type strain 01-Je-003 (=DSM 22082 =CCM 7649).

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijs.0.014100-0
2010-04-01
2024-04-19
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/60/4/909.html?itemId=/content/journal/ijsem/10.1099/ijs.0.014100-0&mimeType=html&fmt=ahah

References

  1. Altenburger P., Kämpfer P., Makristathis A., Lubitz W., Busse H.-J. 1996; Classification of bacteria isolated from a medieval wall painting. J Biotechnol 47:39–52 [CrossRef]
    [Google Scholar]
  2. Altenburger P., Kämpfer P., Akimov V. N., Lubitz W., Busse H.-J. 1997; Polyamine distribution in actinomycetes with group B peptidoglycan and species of the genera Brevibacterium, Corynebacterium and Tsukamurella . Int J Syst Bacteriol 47:270–277 [CrossRef]
    [Google Scholar]
  3. Bhadra B., Raghukumar C., Pindi P. K., Shivaji S. 2008; Brevibacterium oceani sp. nov., isolated from deep-sea sediment of the Chagos Trench. Indian Ocean. Int J Syst Evol Microbiol 58:57–60
    [Google Scholar]
  4. Breed R. S. 1953; The Brevibacteriaceae fam. nov. of order Eubacteriales . Riass Commun VI. Congr Int Microbiol Roma 1:13–14
    [Google Scholar]
  5. Busse H.-J., Auling G. 1988; Polyamine pattern as a chemotaxonomic marker within the Proteobacteria . Syst Appl Microbiol 11:1–8 [CrossRef]
    [Google Scholar]
  6. Collins M. D., Jones D., Keddie R. M., Sneath P. H. A. 1980; Reclassification of Chromobacterium iodinum (Davis) in a redefined genus Brevibacterium (Breed) as Brevibacterium iodinum nom. rev., comb. nov. J Gen Microbiol 120:1–10
    [Google Scholar]
  7. Collins M. D., Farrow J. A. E., Goodfellow M., Minnikin D. E. 1983; Brevibacterium casei sp. nov. and Brevibacterium epidermidis sp. nov. Syst Appl Microbiol 4:388–395 [CrossRef]
    [Google Scholar]
  8. Gavrish E., Krauzova V. I., Potekhina N. V., Karasev S. G., Plotnikova E. G., Altyntseva O. V., Korosteleva L. A., Evtushenko L. I. 2004; Three new species of brevibacteria, Brevibacterium antiquum sp.nov., Brevibacterium aurantiacum sp. nov., and Brevibacterium permense sp. nov. Mikrobiologiia 73:218–225 (in Russian
    [Google Scholar]
  9. Gruner E., Pfyffer G. E., von Graevenitz A. 1993; Characterization of Brevibacterium spp. from clinical specimens. J Clin Microbiol 31:1408–1412
    [Google Scholar]
  10. Heyrman J., Verbeeren J., Schumann P., Devos J., Swings J., De Vos P. 2004; Brevibacterium picturae sp. nov., isolated from a damaged mural painting at the Saint-Catherine chapel (Castle Herberstein, Austria). Int J Syst Evol Microbiol 54:1537–1541
    [Google Scholar]
  11. Ivanova E. P., Christen R., Alexeeva Y. V., Zhukova N. V., Gorshkova N. M., Lysenko A. M., Mikhailov V. V., Nicolau D. V. 2004; Brevibacterium celere sp. nov., isolated from degraded thallus of a brown alga. Int J Syst Evol Microbiol 54:2107–2111 [CrossRef]
    [Google Scholar]
  12. Jones D., Keddie R. M. 1986; Genus Brevibacterium . In Bergey's Manual of Systematic Bacteriology vol 2 pp 1301–1313 Edited by Sneath P. H. A., Mair N., Sharpe M. E., Holt J. G. Baltimore: Williams & Wilkins;
    [Google Scholar]
  13. Kämpfer P., Kroppenstedt R. M. 1996; Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42:989–1005 [CrossRef]
    [Google Scholar]
  14. Kämpfer P., Kroppenstedt R. M. 2004; Pseudonocardia benzenivorans sp. nov. Int J Syst Evol Microbiol 54:749–751
    [Google Scholar]
  15. Kämpfer P., Steiof M., Dott W. 1991; Microbiological characterization of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria. Microb Ecol 21:227–251 [CrossRef]
    [Google Scholar]
  16. Lee S. D. 2006; Brevibacterium samyangense sp. nov., an actinomycete isolated from a beach sediment. Int J Syst Evol Microbiol 56:1889–1892 [CrossRef]
    [Google Scholar]
  17. Lee S. D. 2008; Brevibacterium marinum sp. nov., isolated from seawater. Int J Syst Evol Microbiol 58:500–504
    [Google Scholar]
  18. Ludwig W., Strunk O., Westram R., Richter L., Meier H., Yadhukumar, Buchner A., Lai T., Steppi S. other authors 2004; arb: a software environment for sequence data. Nucleic Acids Res 32:1363–1371 [CrossRef]
    [Google Scholar]
  19. Mages I. S., Frodl R., Bernard K. A., Funke G. 2008; Identities of Arthrobacter spp. and Arthrobacter -like bacteria encountered in human clinical specimens. J Clin Microbiol 46:2980–2986 [CrossRef]
    [Google Scholar]
  20. McBride M. E., Ellner K. M., Black H. S., Clarridge J. E., Wolf J. E. 1993; A new Brevibacterium sp. isolated from infected genital hair of patients with white piedra. J Med Microbiol 39:255–261 [CrossRef]
    [Google Scholar]
  21. Munro G. F., Hercules K., Morgan J., Sauerbier W. 1972; Dependence of the putrescine content of Escherichia coli on the osmotic strength of the medium. J Biol Chem 247:1272–1280
    [Google Scholar]
  22. Olsen G. J., Matsuda H., Hagström R., Overbeek R. 1994; fastDNAml: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Comput Appl Biosci 10:41–48
    [Google Scholar]
  23. Pascual C., Collins M. D. 1999; Brevibacterium avium sp. nov., isolated from poultry. Int J Syst Bacteriol 49:1527–1530 [CrossRef]
    [Google Scholar]
  24. Pascual C., Collins M. D., Funke G., Pitcher D. G. 1996; Phenotypic and genotypic characterization of two Brevibacterium strains from the human ear: description of Brevibacterium otitidis sp. nov. Med Microbiol Lett 5:113–123
    [Google Scholar]
  25. Pruesse E., Quast C., Knittel K., Fuchs B. M., Ludwig W., Peplies J., Glöckner F. O. 2007; silva: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with arb. Nucleic Acids Res 35:7188–7196
    [Google Scholar]
  26. Schleifer K. H. 1985; Analysis of the chemical composition and primary structure of murein. Methods Microbiol 18:123–156
    [Google Scholar]
  27. Stolz A., Busse H.-J., Kämpfer P. 2007; Pseudomonas knackmussii sp. nov. Int J Syst Evol Microbiol 57:572–576
    [Google Scholar]
  28. Tamura K., Dudley J., Nei M., Kumar S. 2007; mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24:1596–1599 [CrossRef]
    [Google Scholar]
  29. Tang S. K., Wang Y., Schumann P., Stackebrandt E., Lou K., Jiang C. L., Xu L. H., Li W. J. 2008; Brevibacterium album sp. nov., a novel actinobacterium isolated from a saline soil in China. Int J Syst Evol Microbiol 58:574–577 [CrossRef]
    [Google Scholar]
  30. Thompson J. D., Higgins D. G., Gibson T. J. 1994; clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680 [CrossRef]
    [Google Scholar]
  31. Tindall B. J. 1990a; Lipid composition of Halobacterium lacusprofundi . FEMS Microbiol Lett 66:199–202 [CrossRef]
    [Google Scholar]
  32. Tindall B. J. 1990b; A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 13:128–130 [CrossRef]
    [Google Scholar]
  33. Wauters G., Charlier J., Janssens M., Delmée M. 2001; Brevibacterium paucivorans sp. nov., from human clinical specimens. Int J Syst Evol Microbiol 51:1703–1707 [CrossRef]
    [Google Scholar]
  34. Wauters G., Avesani V., Laffineur K., Charlier J., Janssens M., Van Bosterhaut B., Delmée M. 2003; Brevibacterium lutescens sp. nov., from human and environmental samples. Int J Syst Evol Microbiol 53:1321–1325 [CrossRef]
    [Google Scholar]
  35. Wauters G., Haase G., Avesani V., Charlier J., Janssens M., Broeck J. V., Delmée M. 2004; Identification of a novel Brevibacterium species isolated from humans and description of Brevibacterium sanhuinis sp. nov. J Clin Microbiol 42:2829–2832 [CrossRef]
    [Google Scholar]
  36. Yamamoto S., Yoshida M., Nakao H., Koyama M., Hashimoto Y., Shinoda S. 1986; Variations in cellular polyamine compositions and contents of Vibrio species during growth in media with various NaCl concentrations. Chem Pharm Bull (Tokyo 34:3038–3042 [CrossRef]
    [Google Scholar]
  37. Ziemke F., Höfle M. G., Lalucat J., Rosselló-Mora R. 1998; Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48:179–186 [CrossRef]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijs.0.014100-0
Loading
/content/journal/ijsem/10.1099/ijs.0.014100-0
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error