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Nucleic Acids Research Advance Access originally published online on November 26, 2007
Nucleic Acids Research 2008 36(Database issue):D5-D12; doi:10.1093/nar/gkm1018
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Nucleic Acids Research, 2008, Vol. 36, Database issue D5-D12
© 2007 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

This article appears in the following Nucleic Acids Research issue: Database issue [View the issue table of contents]

Articles

Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database

Guy Cochrane1,*, Ruth Akhtar1, Philippe Aldebert1, Nicola Althorpe1, Alastair Baldwin1, Kirsty Bates1, Sumit Bhattacharyya1, James Bonfield2, Lawrence Bower1, Paul Browne1, Matias Castro1, Tony Cox2, Fehmi Demiralp1, Ruth Eberhardt1, Nadeem Faruque1, Gemma Hoad1, Mikyung Jang1, Tamara Kulikova1, Alberto Labarga1, Rasko Leinonen1, Steven Leonard2, Quan Lin2, Rodrigo Lopez1, Dariusz Lorenc1, Hamish McWilliam1, Gaurab Mukherjee1, Francesco Nardone1, Sheila Plaister1, Stephen Robinson1, Siamak Sobhany1, Robert Vaughan1, Dan Wu1, Weimin Zhu1, Rolf Apweiler1, Tim Hubbard2 and Ewan Birney1

1EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge. CB10 1SD and 2Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge. CB10 1SA, UK

*To whom correspondence should be addressed. Tel: +44 0 1223 492564; Fax: +44 0 1223 494468; Email: cochrane{at}ebi.ac.uk

Received September 24, 2007. Revised October 23, 2007. Accepted October 27, 2007.

The Ensembl Trace Archive (http://trace.ensembl.org/) and the EMBL Nucleotide Sequence Database (http://www.ebi.ac.uk/embl/), known together as the European Nucleotide Archive, continue to see growth in data volume and diversity. Selected major developments of 2007 are presented briefly, along with data submission and retrieval information. In the face of increasing requirements for nucleotide trace, sequence and annotation data archiving, data capture priority decisions have been taken at the European Nucleotide Archive. Priorities are discussed in terms of how reliably information can be captured, the long-term benefits of its capture and the ease with which it can be captured.


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