Binding of the plant-derived toxin simplexin to bovine protein kinase C: insights from molecular dynamics†
a
Ras Baizureen
Roseli,
a
Natasha L.
Hungerford,
ab
Mary T.
Fletcher,
ab
Diane
Ouwerkerk,
cd
Rosalind A.
Gilbert
cd
and
Elizabeth H.
Krenske
*a
Abstract
Pimelea poisoning of cattle is toxicologically linked to the activation of bovine protein kinase C (PKC) by the plant-derived toxin simplexin. To understand the affinity of PKC for simplexin, we performed molecular dynamics (MD) studies of simplexin, simplexin analogues, and several other activators of PKC. Binding enthalpy calculations indicated that simplexin had the strongest affinity for PKCα-C1B among the activators studied. Key to simplexin's affinity is its ability to form more hydrogen bonds to PKC, compared to the other activators. The C-3 carbonyl group and C-20 hydroxyl group of simplexin were identified as especially important for stabilizing the PKC binding interaction. The hydrophobic alkyl chain of simplexin induces deep membrane embedding of the PKC–simplexin complex, enhancing the protein–ligand hydrogen bonding. Our findings align with previous experiments on structure–activity relationships (SAR) for simplexin analogues, and provide insights that may guide the development of interventions or treatments for Pimelea poisoning.
- This article is part of the themed collection: Computational Organic Chemistry
Please wait while we load your content...
