Skip to main content
Log in

Reconstruction of the three-dimensional NMR spectrum of a protein from a set of plane projections

  • Published:
Journal of Biomolecular NMR Aims and scope Submit manuscript

Abstract

Three-dimensional protein NMR spectra can be obtained significantly faster than by traditional methods by a projection-reconstruction procedure related to X-ray tomography. First, two orthogonal projections are acquired in quick two-dimensional experiments with the evolution parameters t1 or t2 set to zero. These projections define a three-dimensional lattice; all cross-peaks must lie on this lattice but not all lattice points are occupied. A third experiment with t1 and t2 incremented simultaneously and in a fixed ratio, generates a projection onto a tilted plane and thus establishes the positions of all the cross-peaks unambiguously. This projection-reconstruction technique has been tested on the 500 MHz three-dimensional HNCO spectrum of ubiquitin.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Aue, W.P., Bartholdi, E. and Ernst, R.R. (1976) J. Chem. Phys., 64, 2229.

    Google Scholar 

  • Bracewell, R.N. (1956) Austr. J. Phys., 9, 198.

    Google Scholar 

  • Brutscher, B., Morelle, N., Cordier, F. and Marion, D. (1995) J. Magn. Reson., B109, 338-242.

    Google Scholar 

  • Chen, J., De Angelis, A.A., Mandelshtam, V.A. and Shaka, A.J. (2003) J. Magn. Reson., 162, 74-89.

    Google Scholar 

  • Chen, J., Mandelshtam, V.A. and Shaka, A.J. (2000) J. Magn. Reson., 146, 363-368.

    Google Scholar 

  • Ding, K. and Gronenborn, A. (2002) J. Magn. Reson., 156, 262-268.

    Google Scholar 

  • Frydman, L., Lupulescu, A. and Scherf, T. (2003) J. Amer. Chem. Soc., 125, 9204-9217.

    Google Scholar 

  • Frydman, L., Scherf, T. and Lupulescu, A. (2002) Proc. Natl. Acad. Sci. USA, 99, 15859-15862.

    Google Scholar 

  • Hounsfield, G.N. (1973) Brit. J. Radiol., 46, 1016.

    Google Scholar 

  • Jeener, J. (1971) Ampère International Summer School, Basko Polje, Yugoslavia.

  • Kay, L.E., Xu, G.Y. and Yamazaki, T.J. (1994) J. Magn. Reson., A109, 129-133.

    Google Scholar 

  • Kim, S. and Szyperski, T. (2003) J. Am. Chem. Soc., 125, 1385-1393.

    Google Scholar 

  • Kozminski, W. and Zhukov, I. (2003) J. Biomol. NMR, 26, 157-166.

    Google Scholar 

  • Kupče, E. and Freeman, R. (2003a) J. Magn. Reson., 162, 300-310.

    Google Scholar 

  • Kupče, E. and Freeman, R. (2003b) J. Magn. Reson., 163, 56-63.

    Google Scholar 

  • Kupče, E. and Freeman, R. (2003c) J. Biomol. NMR, 25, 349-354.

    Google Scholar 

  • McIntyre, L. and Freeman, R. (1989) J. Magn. Reson., 83, 649-635.

    Google Scholar 

  • McIntyre, L. Wu, X-L. and Freeman, R. (1990) J. Magn. Reson., 87, 194-201.

    Google Scholar 

  • Nagayama, K. Bachmann, P. Wüthrich, K. and Ernst, R.R. (1978) J. Magn. Reson., 31, 133.

    Google Scholar 

  • Szyperski, T., Yeh, D.C., Sukumaran, D.K., Moseley, H.N.B. and Montelione, G.T. (2002) Proc. Natl. Acad. Sci. USA, 99, 8009-8014.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Ray Freeman.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kupče, E., Freeman, R. Reconstruction of the three-dimensional NMR spectrum of a protein from a set of plane projections. J Biomol NMR 27, 383–387 (2003). https://doi.org/10.1023/A:1025819517642

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/A:1025819517642

Navigation