Web Release Date: January 31,
DFT Calculations of the Electron Affinities of Nucleic Acid Bases: Dealing with Negative Electron Affinities
Department of Chemistry, Oakland University, Rochester, Michigan 48309
Received: August 29, 2001
In Final Form: December 4, 2001
Abstract:
To better understand the cause of the diversity in reported values of the electron affinities (EAs) for DNA
bases, we performed a series of DFT (B3LYP functional) calculations at different basis set sizes. Through
investigation of (1) trends in the values of EAs, (2) the excess electron spin distribution of the anion radical
dependence on basis set size, (3) effect of the excess electron on ZPEs, we are able to identify the features
of a basis set that allows for dipole-bound and continuum states to compete with molecular states for the
electron. Smaller basis sets that confine the excess electron to the molecule allow for reasonable estimates of
relative valence electron affinities excluding dipole-bound states and suggest the order of adiabatic valence
electron affinities to be U
T > C
I (hypoxanthine) > A > G with G nearly 1 eV less electron affinic
than U. Combining the best estimates from theory and experiment we place the adiabatic valence electron
affinities of the pyrimidines as zero to +0.2 eV, whereas the purines A and G are predicted to be clearly
negative with electron affinities of ca. -0.35 and -0.75 eV, respectively. The virtual states (i.e., negative
electron affinities) for A and G in the gas-phase become relevant to biology when their energies are lowered
to bound states in solvated systems. Indeed, our calculations performed including the effect of solvation
(PCM model) show that all EAs for the DNA bases are positive and have the same relative order as found
with the compact basis sets in the gas-phase calculations.
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