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doi:10.1016/j.pep.2006.09.007    
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Copyright © 2006 Elsevier Inc. All rights reserved.

Sequence specificity and efficiency of protein N-terminal methionine elimination in wheat-embryo cell-free system

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Takuya Kannoa, Michiko Kitanob, Rika Katob, Akira Omorib, Yaeta Endoa, c and Yuzuru Tozawaa, c, Corresponding Author Contact Information, E-mail The Corresponding Author

aCell-Free Science and Technology Research Center, Ehime University, 3 Bunkyo-cho, Matsuyama 790-8577, Japan

bMitsubishi Kagaku Institute of Life Sciences, 11 Minamiooya, Machida 194-8511, Japan

cThe Venture Business Laboratory, Ehime University, 3 Bunkyo-cho, Matsuyama 790-8577, Japan


Received 8 July 2006; 
revised 6 September 2006. 
Available online 20 September 2006.

Abstract

Recent improvements in wheat-embryo cell-free translation resulted in a highly productive system for protein preparation. To clarify N-terminal processing of the cell-free system in a preparative-scale (> mg protein product per ml), 20 mutant variants of maltose-binding protein (MalE), each having a different penultimate residue in the sequence Met-Xaa-Ile-Glu-, and 20 glutathione S-transferase (GST) variants, having Met-Xaa-Pro-Ile-sequence, were designed and synthesized. The MalE and GST proteins were purified by amylose-resin and glutathione columns, respectively, followed by analysis of their N-terminal sequences. These investigations revealed that sequence specificity and efficiency of the N-terminal Met (N-Met) elimination in the cell-free system are similar to those reported from investigations in cellular systems or in the wheat-embryo cell-free protein expression system in analytical scale (not, vert, similar10 μg protein product per ml). Cleavage of the N-Met is basically determined by the penultimate amino acid in the polypeptide sequence. In the case of MalE, the cleavage was efficient when the penultimate residue was Ala, Cys, Gly, Pro, Ser or Thr. But, in the case of GST with Pro as the antepenultimate residue, the efficiency was significantly reduced when the penultimate residue was Gly or Thr. We also confirmed that substitution of the antepenultimate residue in MalE to Pro drastically reduced the efficiency of N-Met cleavage when the penultimate residue was Ala, Gly, Pro, Ser or Thr, indicating inhibitory effects of antepenultimate residue Pro on N-Met elimination. These results clarified sequence-specific functions of the endogenous N-terminal processing machinery in the scaled-up wheat-embryo cell-free translation system.

Keywords: Cell-free protein synthesis; Wheat-embryo; N-terminal processing; Methionine aminopeptidase

Article Outline

Materials and methods
Cell-free protein synthesis and protein purification
N-terminal amino acid sequence analysis
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry
Results
Synthesis of MalE- and GST-variants
Sequence analysis for synthesized proteins
Effect of antepenultimate amino acid residue on N-Met cleavage
Mass spectrometric analysis of MalE mutants
Comparison of N-Met cleavage efficiency between two different protein synthesis-methods, dialysis method and the bilayer translation method
Post-translational N-terminal processing by intrinsic MAP in wheat-embryo extract
Discussion
Acknowledgements
References



Corresponding Author Contact InformationCorresponding author. Fax: +81 89 927 8276.

 
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