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doi:10.1016/j.pep.2005.10.015    
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Copyright © 2005 Elsevier Inc. All rights reserved.

Preparation of isotopically labeled spinach acyl–acyl carrier protein for NMR structural studiesstar, open

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Gregory A. Zornetzer, Robert D. White, John L. Markley and Brian G. FoxCorresponding Author Contact Information, E-mail The Corresponding Author

Department of Biochemistry, University of Wisconsin-Madison, 433 Babcock Drive, Madison, WI 53706-1549, USA


Received 19 July 2005; 
revised 4 October 2005. 
Available online 7 November 2005.

Abstract

Acyl carrier proteins (ACPs) are important protein cofactors in fatty acid biosynthesis, but their acylated forms have not been well-studied. To permit detailed nuclear magnetic resonance studies of acylated spinach ACP isoform I, we have developed a new expression plasmid for recombinant production of the apo-protein and modified protocols for purifying the protein product and acylating it to form acyl-ACP. To solve plasmid stability problems associated with growth in minimal media, the ampicillin resistance gene from pSACP-2a was replaced with the tetA(C) gene from pBR322. The resulting plasmid, pSACP-2t, supported overexpression of apo-ACP in Escherichia coli BL21(DE3) cells in M9 medium containing 15NH4Cl as the sole nitrogen source. Apo-ACP was purified to homogeneity by means of polyethylene glycol precipitation and anion exchange. Two in vitro synthetic routes were used to produce acyl–ACPs. In one route, apo-ACP was converted to the holo form and the acyl form by a published protocol that employs a discrete enzymatic reaction for each step. As an alternative route to produce decanoyl-ACP, apo-ACP was directly converted to the acyl form by using holo-ACP synthase along with the non-natural substrate decanoyl-CoA. Two-dimensional 1H–15N NMR spectroscopy of decanoyl-ACP and stearoyl-ACP revealed that changes in the length of the covalently attached fatty acid do not affect the secondary structure of the protein but do influence the local conformation and dynamics.

Keywords: Acyl carrier protein; NMR; 15N HSQC; Acylation; Fatty acid biosynthesis; Acyl-acyl carrier protein synthase; Holo acyl carrier protein synthase; Spinach

Article Outline

Materials and methods
Chemicals, enzymes, plasmids, and bacterial strains
PCR amplification
Cloning of tetA(C) gene into pSACP-2a
Characterization of pSACP-2t
Protein expression
Protein purification
Mass spectrometric analysis
Acylation reactions
NMR spectroscopy
Results
Production of recombinant spinach apo-ACP
Purification of apo-ACP
Attachment of different acyl chains to ACP
NMR of acyl-ACP’s
Discussion
Rationale for creation of pSACP-2t
Fed-batch expression
Purification
Different acyl-ACPs studied
NMR results
Acknowledgements
References






star, openThis work was supported by the National Institutes of Health Grants R01 GM-50853 to B.G.F. and R01 GM-58667 to J.L.M. NMR data were collected at the National Magnetic Resonance Facility at Madison (NMRFAM), which is supported by a grant from the NIH Biomedical Research Technology Program (P41 RR-02301) and contains instrumentation purchased with funds from P41 RR-02301, the University of Wisconsin, the NSF Biological Instrumentation Program (DMB-8415048), NIH Shared Instrumentation Program (RR-02781), and the U.S. Department of Agriculture. G.A.Z. and R.D.W. were trainees of the NIH Institutional Biotechnology Pre-Doctoral Training Grant T32 GM-08349.


Corresponding Author Contact InformationCorresponding author. Fax: +1 608 262 3453.

 
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