Experimental and theoretical corroboration of antimicrobial and anticancer activities of two pseudohalides induced structurally diverse Cd (II)-Salen complexes

https://doi.org/10.1016/j.molstruc.2020.129189Get rights and content

Highlights

  • Two tetranuclear Cd (II)-Salen complexes have been synthesized and described.

  • Single-crystal X-rays reveal remarkable structural diversity.

  • Antibacterial and fungal activity was detected.

  • Cytotoxic effects were assessed using MTT assay against A549 and Panc-1cell line.

  • Analysis of molecular docking of EGFR tyrosine kinase and cyclin-dependent 2-protein kinase.

Abstract

Two new cadmium (II) complexes, viz., [Cd4(L1)2(ƞ1-NCS)2(µ221-OAc)2] (C1) and [Cd4(L2)21,1-N3)4]n (C2) (H2L1= N, N-ethylene bis(3-methoxysalicylaldimine), H2L2= N, N-ethylene bis(3-ethoxysalicylaldimine) were impeccably synthesized and structurally characterized using various sophisticated analytical techniques including SCXRD. X-ray diffraction confirmed complexes possess Cd4 structural motifs with two distinctive geometrical arrangements displayed around the central Cd (II) ion. Supramolecular architecture and multi-dimensional polymer formation reunited through the utilization of all anionic forms of ligands taken after by bridging bolster of pseudo-halide ions. Supramolecular interactions are more easily discernible through Hirshfeld surfaces and fingerprint plots. Herein, we demonstrated the potential role of the as-synthesized complexes towards the antimicrobial and anticancer activity. To address the issue, compounds are tested for antibacterial and antifungal activities against the bacteria Staphylococcus aureus (ATCC 25923), Bacillus subtilis (ATCC 6635), Pseudomonas aeruginosa (ATCC 27853), Escherichia coli (ATCC 25922), and fungal Candida albicans (ATCC 10231). The antimicrobial screening revealed that C1-C2 demonstrated higher action over ligands (L1-L2), thus, simply signifies the endowment of the compound's structural environment on these biological movements. Further, compounds anticancer activity was determined against A549 (Human lung carcinoma) and Panc-1 (Human pancreatic) lines using MTT assay. Molecular docking was performed to correlate the experimental binding results between complexes and the targeted proteins responsible for bacterial or cancerous features. Herewith, E. coli enzyme MurB (PDB ID: 2q85), B. subtilis SMC head domain (PDB ID: 5h67), cyclin-dependent kinase 2-associated protein 1 (PDB ID: 2kw6), and Epidermal Growth Factor Receptor (EGFR) tyrosine kinase domain (PDB ID: 1m17) have been selected to identify the true binding modes and docking poses, which are responsible for this superior biological activity. Subsequently, the current research puts in an exertion to crack a new Cd (II)-mediated complex as an antibacterial and anticancer drug which may demonstrate to be a moo fetched pharmaceutical.

Introduction

Though cadmium is traditionally plotted as a hazard for the environment and different organisms yet it is broadly utilized in electric batteries, pigments in plastics, and electroplated steel [1]. The combinational impact of Cd (II) ions and organic host along with anions like SeCN, N3, SCN, I, Br, Cl, etc. can substantially decrease the toxicity of the core metal ion and influence the potential biological applications. In the interim, Cd (II)-Salen buildings announced for expanded acknowledgment within the sight of an appropriate pseudo-halide linker because of its rich structural feature and working as the prime role for antimicrobial and anticancer activities [2], [3], [4], [5], [6], [7], [8], [9], [10], [11]. The high-level cadmium exposure also has a detrimental effect on the liver and kidney (cancer mortality) [12]. Moreover, Cd (II) linked CPs infinite frameworks (1D to 3D) have been the subject of great interest in recent years as they are superior to monomer/dimer analogues attributable to their expected applications in catalysis, optical properties, supramolecular chemistry, clathrate, and materials science [13], [14], [15], [16], [17], [18], [19], [20], [21], [22]. In the expansion, the d10 configuration, zero CFSE, and softness of Cd (II) ion allow a wide assortment of geometrical arrangements and coordination numbers [23]. In this fashion, a genuine interest is growing in the structure and unions of minimal effort Cd (II)-interceded supramolecular design in recent years, which possibly progressed pharmacological properties. Nowadays, the multifaceted advantage of different Salen-based ligands along with pseudo-halides has been preferred for better chelation with Cd (II) metal ion. Besides, metal-based bio-medicinal drugs syntheses by exploiting N/O-donor ligands platform along with azomethine (CH=N-) linkage have picked up extraordinarily significant throughout the most recent couple of years not only structural chemistry but these are also having potential as drug carriers, antimicrobial and imaging agents [24], [25], [26], [27]. Meanwhile, the medicinal inorganic chemistry branch received a continuing research interest in the diverse field of biomedical applications such as DNA binding [28], antimicrobial [29], anticancer [30], antiviral [31], antifungal, antimalarial, antitumor agents [32], [33], [34], [35], anti-inflammatory and antiamoebic activities [36,37]. In the 21st century, for globally developing country's cancer is the foremost lethal infection where Pancreatic disease is the fourth driving reason for disease-related demise [38], [39], [40], [41], [42]. Now a day's novel M (II)-Salen complexes have been prescribed for cancer treatment and other diseases [43,[44], [45], [46], [47]] and it is the other substitute to platinum drugs e.g. cisplatin or carboplatin [48,49]. However, these metal drugs are still enduring from several side effects, including nephrotoxicity, gametogenesis, and neurotoxicity [50], thus require some targeted syntheses.

The coordination behaviours of Zn2+/Cd2+/Hg2+ ions with N2O4-proligand platform is continuously well-studied research area because of its flexible coordination numbers, nuclearities, and interesting molecular crystalline architectures. Pseudo-halides like N3/SCN are flexible spacers which potentially bridged with M(II) ions to fortify polynuclear complex formations (Scheme S2A-S2B) [51,52] where stereochemistry and coordination number accomplishment the idea of pseudo-halides as well as to the steric necessities of the ligands [53,54]. To date, we have only explored the cytotoxic effect of dicyanamide modulated Zn (II)-Salen complexes [55,56] but at this minute Cd (II)-Salen complexes cytotoxic impacts are detailed. Our choice over cadmium metal isn't just for its growing biological interest but also to the novel applications such as solid-state emitting materials [57], light-harvesting photo catalysis, and fluorescent sensors for organic or inorganic analyses [58].

Taking after all these foundations, the present communication focuses on the syntheses, characterization, crystal structures, self-assembled molecular architectures, antimicrobial profile, and cytotoxic effects of two polymeric Cd (II) complexes viz., [Cd4(L1)2(ƞ1-NCS)2(µ221-OAc)2] (C1) and [Cd4(L2)21,1-N3)4]n (C2) respectively (H2L1= N, N-ethylene bis(3-methoxysalicylaldimine, H2L2= N, N-ethylene bis(3-ethoxysalicylaldimine). Finally, the molecular docking experiment was depicted to explain the binding capability between the Cd (II) complexes and bacteria/cancer-targeted macromolecular protein chain. Consequently, we are the first time developing the experimental and theoretical corroboration of polymeric Cd (II)-supramolecular architecture towards antimicrobial and anticancer properties.

Section snippets

Starting materials and instrumentation

The research chemicals and solvents used in the current research work were of commercially available and reagent grade. Purchased reagents used without any further purification. Ortho vanillin and ethylenediamine was bought from the Sigma Aldrich Company. Cd (OAc)2.2H2O, KSCN, and NaN3 were bought from E. Merck, SDFCL, India. Elemental (CHN) assessments were assigned on a Perkin-Elmer 2400 basic analysers. FT-IR and Raman spectra were recorded as KBr pellets (4000–400 cm-1) utilizing the

Synthetic rationalization

Salen-type ligands were synthesized by the condensation of ethylenediamine with ortho vanillin in MeOH at 1:2 molar ratio (Scheme 1) [67]. Cd(II)-mediated complexes derived from ortho vanillin condensed Schiff bases were prepared in moderate good yield by taking the following more familiar in situ procedure where (1:1:1M) of cadmium acetate dehydrate, respective ligands, and KSCN/NaN3 in minimum volume aqueous methanol solution under stirred and refluxed after addition of a few drops DMF (

Structural descriptions of [Cd4(L1)2(ƞ1-NCS)2(µ221-OAc)2] (C1)

Single-crystal X-ray diffraction study of C1 reveals that it is a neutral tetranuclear complex formulated as [Cd4(L1)2(ƞ1-NCS)2(µ221-OAc)2] and crystallized in the orthorhombic system with space group Pbcn (Z=4). The ORTEP crystallographic asymmetric unit is presented below (Fig. 1) and the selected important bond lengths and bond angles are given in Table S1. The formation of tetranuclear assembly involves the cumulative coordination action of the two doubly deprotonated ligands [L1]2−.

The

Hirshfeld surface

Short intermolecular contacts of the tetranuclear cadmium complexes can be evaluated using the Hirshfeld surface (HS) and 2D unique mark plot. The atomic HS [75,76] is framed dependent on the electron dispersion of a particle and has been resolved as the aggregate of spherical atom electron densities [77]. HS is extraordinary for each set of crystal structures. Condition (1), which depends on both de and di, and the van der Walls radii of the atom give the standardized contact separation (dnorm

FT-IR and Raman characterization

Salen ligands and complexes were characterized by FT-IR and Raman spectroscopic methods. The characteristic imines (C=N) stretching vibration of ligands were found to be 1632 cm−1 (Fig. S1) [80]. The absence of the N-H stretching band in complexes (at 3150 cm−1) indicated the condensation of all the primary amine groups [80]. Band near at 3431-3437 cm−1 of two ligands is due to O-H stretching, which is completely disappeared in the synthesized tetranuclear Cd (II) complexes. Herein, FT-IR and

Antibacterial/fungal assay

The antimicrobial activity of the ligands and associated complexes was tested against two Gram-positive and two Gram-negative bacteria and a fungal strain (Fig. S18). The mean zone diameter and MIC values of selected compounds are tabulated (Table 3, Table 4). H2L1 shows activity against all selected microorganisms (Staphylococcus aureus, Pseudomonas aeruginosa, Escherichia coli, and Candida albicans) except Bacillus subtilis, among them good activity against Staphylococcus aureus whereas H2L2

Time-kill kinetics

Time-kill kinetic study exhibits basic pharmacodynamic information on the relationship between the synthesized compound and the growth of microorganisms. Along these lines, this test, adds to a superior comprehension of ebb and flow and future use of the compound against the diseases brought about by the individual bacteria or fungi. Time kill kinetics study for C2 against one Gram-positive, one Gram-negative bacteria and one fungus is shown in Fig. S19-21. The untreated controls represented

Anticancer activity

The MTT test of the newly synthesized compounds showed a huge anticancer movement on A549 and Panc-1 disease cells (Fig.6A-6B). Increasing concentration (5-40 µM), there was an increment in cancer cells death. The microscopic images demonstrate the anticancer potential of these compounds about the paclitaxel (Fig. S22-S23). C2 outshined in both cancerous cell lines, killing capability on both A549 (80.99%) and Panc-1 (74.13%) cell, while L1, L2 and C1 also showed significant anticancer

Mitochondrial membrane potential loss

Mitochondrial dysfunction or loss of mitochondrial transmembrane potential (ΔΨM) has been shown to induce programmed cell death and thus play a central role in the apoptotic pathway [91]. The mitochondrial depolarization was determined in A549 cancer cells and a significant decrease in Rh123 fluorescence was found when cells were treated with the synthesized compounds (Fig. 7). Moreover, C2 (20 µM) displayed the highest mitochondrial depolarization 2fold) in A549 cancer cells over the other

Structure-activity relationship (SAR)

The synthesized Cd (II)-Salen complexes structure-activity relationship (SAR) can be clarified in (Fig. S24). The biological data revealed there is an enhancement of antibacterial/fungal movement because of the formation of azomethine linkage (-C=NH-) in the synthesized Cd (II) complexes when contrasted with bio-active and sensitive starting material ortho vanillin [90]. In this context, the normal cell processes can be affected through the formation of hydrogen bonding with azomethine nitrogen

Molecular docking

Auto Dock is considered as the modern unique methods used to illustrate and demonstrate the benefits of biological features of ligands and C1-C2 and to have reliable results on experimental data. To understand the compatibility of Cd (II) complexes towards both co-crystallized proteins, docking studies have been performed with all possible combinations and the results are shown in Table 6. Interestingly, the outcomes from this method are in acceptable understanding and match well with their

Concluding remarks

Utilizing two different Salen-based ligands and pseudo-halide spacers we serendipitous isolated two tetranuclear Cd (II) complexes, [Cd4(L1)2(ƞ1-NCS)2(µ221-OAc)2] (C1) and [Cd4(L2)21,1-N3)4]n (C2). Two complexes are the typical example of pseudo-halide dependent structural diversity where C1 is discrete, while C2 1D polymers. SCXRD revealed that in C1 and C2, common Cd4-structural motifs are present with two non-identical geometrical environments around the central Cd (II) ion. C1 and C2

CRediT authorship contribution statement

Dhrubajyoti Majumdar: Data curation, Conceptualization, Methodology, Investigation, Software, Visualization, Writing - original draft, Writing - review & editing. Jessica Elizabeth Philip: Software, Visualization. Sourav Das: Software, Visualization. Bidyut Kumar Kundu: Software, Visualization. Reena V. Saini: Software, Visualization. Gourav Chandan: Software, Visualization. Kalipada Bankura: Software, Visualization. Dipankar Mishra: Supervision, Writing - review & editing, Funding acquisition,

Declaration of Competing Interest

All authors declare no competing interest regarding the article publication.

Acknowledgments

This research work did not receive any specific grant from funding agencies in the public, commercial or not-profit sectors. Dr. Dipankar Mishra gratefully acknowledges the financial grant sanctioned by UGC, New Delhi, in his favour refer to Minor Research Project (F.PSW-232/15-16(ERO).

References (92)

  • M. Abid et al.

    Synthesis and antiamoebic activity of metronidazole thiosemicarbazone analogues

    Eur. J. Med. Chem.

    (2008)
  • N. Bharti et al.

    Synthesis, characterization and in vitro anti-amoebic activity of new palladium (II) complexes with 5-nitrothiophene-2-carboxaldehyde N (4)-substituted thiosemicarbazones

    Bioorg. Med. Chem.

    (2004)
  • H.M. Aly et al.

    Synthesis and characterization of novel Cu (II) complexes with 3-substituted-4-amino-5-mercapto-1,2,4-triazole Schiff bases: a new route to CuO nanoparticles

    J. Mol. Struct.

    (2015)
  • J. Devi et al.

    Synthesis, characterization and antimicrobial activities of mixed ligand transition metal complexes with isatin mono hydrazone Schiff base ligands and heterocyclic nitrogen base

    Spectro. Chim. Acta A

    (2015)
  • M.X. Li et al.

    Synthesis, crystal structures, and biological evaluation of Cu (II) and Zn (II) complexes of 2-benzoylpyridine Schiff bases derived from S-methyl- and S-phenyldithiocarbazates

    J. Inorg. Biochem.

    (2012)
  • M. Pait et al.

    Copper (II) complexes of piperazine based ligand: synthesis, crystal structure, protein binding and evaluation of anti-cancerous therapeutic potential

    Inorg. Chim. Acta

    (2014)
  • H. Zhang et al.

    Molecular and crystal engineering of a new class of inorganic cadmium-thiocyanate polymers with host–guest complexes as organic spacers, controllers, and templates

    Coord. Chem. Rev.

    (1999)
  • J.L. Burmeister

    Linkage isomerism in metal complexes

    Coord. Chem. Rev.

    (1968)
  • D.J. Majumdar et al.

    Syntheses, X-ray crystal structures of two new Zn(II)-dicyanamide complexes derived from H2vanen-type compartmental ligands: investigation of thermal, photoluminescence, in vitro cytotoxic effect and DFT-TDDFT studies

    Inorg. Chim. Acta

    (2019)
  • T. Mosmann

    Rapid colorimetric assay for cellular growth and survival: application to proliferation and cytotoxicity assays

    J. Immunol. Methods

    (1983)
  • D.J. Majumdar et al.

    Dicyanamide-interlaced assembly of Zn(II)-schiff-base complexes derived from salicylaldimino type compartmental ligands: syntheses, crystal structures, FMO, ESP, TD-DFT, fluorescence lifetime, in vitro antibacterial and anti-biofilm properties

    Inorg. Chim. Acta

    (2019)
  • P. Ghorai et al.

    Anion-reliant structural versatility of novel cadmium (II) complexes: synthesis, crystal structures, photoluminescence properties and exploration of unusual O—S chalcogen binding involving thiocyanate coligand

    Inorg. Chim. Acta

    (2018)
  • M.A. Spackman et al.

    A novel definition of a molecule in a crystal

    Chem. Phys. Lett.

    (1997)
  • G.J. Sole et al.

    An Introduction to the Optical Spectroscopy of Inorganic Solids

    (2005)
  • A.H. Kianfar et al.

    Synthesis, spectroscopy, electrochemistry and thermal study of Ni (II) and Cu (II) unsymmetrical N2O2 Schiff base complexes

    Spectrochim. Acta. Part A

    (2010)
  • N. Raman et al.

    A novel bioactive tyramine derived Schiff base and its transition metal complexes as selective DNA binding agents

    Spectrochim. Acta. Part A

    (2011)
  • S.N. Lopez et al.

    In vitro antifungal evaluation and structure–activity relationships of a new series of chalcone derivatives and synthetic analogues, with inhibitory properties against polymers of the fungal cell wall

    Bioorg. Med. Chem.

    (2001)
  • J. Devi et al.

    Some divalent metal (II) complexes of salicylaldehyde‐derived Schiff bases: synthesis, spectroscopic characterization, antimicrobial and in vitro anticancer studies

    Appl. Organometal. Chem.

    (2019)
  • S.B. Roy et al.

    A novel fluorene based “turn on” fluorescent sensor for the determination of zinc and cadmium: experimental and theoretical studies along with live cell imaging

    New J. Chem.

    (2016)
  • T.W. Lane et al.

    A biological function for cadmium in marine diatoms

    Proc. Natl. Acad. Sci.

    (2000)
  • N. Palanisami et al.

    Synthesis, characterization, and nonlinear optical properties of transition metal complexes bearing donor–acceptor ferrocenyl Schiff bases

    Sci. Adv. Mater.

    (2014)
  • K. Agapiou et al.

    Multinuclear Cd, Cd3 and 1-D framework structures of Cd (II) Schiff base complexes

    Dalton Trans.

    (2009)
  • M. Das et al.

    Targeted synthesis of cadmium (ii) Schiff base complexes towards corrosion inhibition on mild steel

    RSC Adv.

    (2017)
  • I. Majumder et al.

    Deep insight into the photoluminescence properties of Schiff Base CdII and ZnII complexes

    Inorg. Chem.

    (2017)
  • A. Halder et al.

    A Schiff Base macrocycle ligand and its Mg (II) and Cd (II) complexes: spectral properties with theoretical understanding and biological activity

    ChemistrySelect

    (2017)
  • X. Zhou et al.

    Cadmium-coordinated supramolecule suppresses tumor growth of T-cell leukemia in mice

    Cancer Sci.

    (2015)
  • World Health Organization, AvenueAppia 20, 1211, Geneva, 27, Switzerland,...
  • G.R. Desiraju et al.

    The Weak Hydrogen Bond in Structural Chemistry and Biology

    (1999)
  • M. Nishio et al.

    The CH/π Interaction

    (1998)
  • S.R. Batten et al.

    Coordination Polymers: Design, Analysis and Application

    (2009)
  • M.-C. Hong et al.

    Design and Construction of Coordination Polymers

    (2009)
  • G.R. Desiraju et al.

    Crystal Engineering: a Text Book

    (2011)
  • M. Eddaoudi et al.

    Zeolite-like metal–organic frameworks (ZMOFs): design, synthesis, and properties

    Chem. Soc. Rev.

    (2015)
  • C. Janiak et al.

    MOFs, MILs and more: concepts, properties and applications for porous coordination networks (PCNs)

    New J. Chem.

    (2010)
  • S. Kitagawa et al.

    Functional Porous Coordination Polymers

    Angew. Chem. Int. Ed.

    (2004)
  • H.-C. Zhou et al.

    Introduction to metal–organic frameworks

    Chem. Rev.

    (2012)
  • Cited by (34)

    View all citing articles on Scopus
    View full text