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Journal of Computational Physics
Volume 212, Issue 2, 1 March 2006, Pages 757-777
 
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doi:10.1016/j.jcp.2005.07.020    How to Cite or Link Using DOI (Opens New Window)
Copyright © 2005 Elsevier Inc. All rights reserved.

Simulating the deformation of vesicle membranes under elastic bending energy in three dimensionsstar, open

Qiang DuCorresponding Author Contact Information, E-mail The Corresponding Author, Chun LiuE-mail The Corresponding Author and Xiaoqiang WangE-mail The Corresponding Author

Department of Mathematics, Pennsylvania State University, 218 McAllister Building, University Park, PA 16802, United States

Received 22 May 2005; 
revised 25 July 2005; 
accepted 27 July 2005. 
Available online 15 September 2005.

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Abstract

In this paper, we study the three-dimensional deformation of a vesicle membrane under the elastic bending energy, with prescribed bulk volume and surface area. Both static and dynamic deformations are considered. A newly developed energetic variational formulation is employed to give an effective Eulerian description. Efficient time and spatial discretizations are considered and implemented. Numerical experiments illustrate some fascinating phenomena that are of interests in real applications.

Keywords: Vesicle membrane; Elastic bending energy; Energetic variational approach; Diffusive interface approximation; Phase field model; Numerical methods; Three-dimensional simulation

Article Outline

1. Introduction
2. An energetic variational formulation
3. Numerical schemes
3.1. Implicit scheme and discrete energy law
3.2. Lagrange multipliers and time step adjustment
3.3. Parallel implementations
4. Numerical simulation
4.1. Initial data preparation
4.2. Convergence verification
4.3. Three-dimensional numerical experiments
4.3.1. Axis-symmetric cases
4.3.2. Symmetric torus and non-symmetric torus
4.3.3. Non-zero spontaneous curvature cases
4.3.4. Constrained self-assembly
4.4. Euler number
5. Conclusion
Acknowledgements
References

















 
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