Elsevier

Data in Brief

Volume 17, April 2018, Pages 512-516
Data in Brief

Data Article
Data on xylem sap proteins from Mn- and Fe-deficient tomato plants obtained using shotgun proteomics

https://doi.org/10.1016/j.dib.2018.01.034Get rights and content
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Abstract

This article contains consolidated proteomic data obtained from xylem sap collected from tomato plants grown in Fe- and Mn-sufficient control, as well as Fe-deficient and Mn-deficient conditions. Data presented here cover proteins identified and quantified by shotgun proteomics and Progenesis LC-MS analyses: proteins identified with at least two peptides and showing changes statistically significant (ANOVA; p ≤ 0.05) and above a biologically relevant selected threshold (fold ≥ 2) between treatments are listed. The comparison between Fe-deficient, Mn-deficient and control xylem sap samples using a multivariate statistical data analysis (Principal Component Analysis, PCA) is also included. Data included in this article are discussed in depth in the research article entitled “Effects of Fe and Mn deficiencies on the protein profiles of tomato (Solanum lycopersicum) xylem sap as revealed by shotgun analyses” [1]. This dataset is made available to support the cited study as well to extend analyses at a later stage.

Keywords

Iron deficiency
Mn deficiency
Proteomics
Shotgun proteomics
Tomato
Xylem sap

Cited by (0)

1

Current address: SCIEX S.L. Calle Valgrande 8, Alcobendas, 28108 Madrid, Spain.

2

Current address: Central Infrastructure Group Genomics and Transcript Profiling, Max-Planck-Institute of Molecular Plant Physiology, Am Muhlenberg 1, 14476 Postdam, Germany.