CirRNAPL: A web server for the identification of circRNA based on extreme learning machine
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Abbreviations
circRNA
circular RNA
RF
random forest
PSO
particle swarm optimization algorithm
lncRNAs
long non-coding RNAs
PCGs
protein coding genes
DAC
Dinucleotide-based auto-covariance
DCC
Dinucleotide-based cross-covariance
DACC
Dinucleotide-based auto-cross-covariance
MAC
Moran autocorrelation
GAC
Geary autocorrelation
NMBAC
Normalized Moreau–Broto autocorrelation
PC-PseDNC-General
General parallel correlation pseudo-dinucleotide composition
SC-PseDNC-General
General series correlation pseudo-dinucleotide composition
Triplet
Local structure-sequence triplet element
PseSSC
Pseudo-structure status composition
PseDPC
Pseudo-distance structure status pair composition
ELM
extreme learning machine
RBF
radial basis function
CNN
Convolutional Neural Networks
SVM
support vector machine
SE
Sensitivity
SP
Specifity
ACC
Accuracy
MCC
Matthews Correlation Coefficient
MRMD
Maximum-Relevance-Maximum-Distance
Keywords
Circular RNA
Extreme learning machine
Particle swarm optimization algorithm
Identification
Expression level
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These authors contributed equally to this study
© 2020 The Authors. Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology.