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Current Opinion in Biotechnology
Volume 15, Issue 1, February 2004, Pages 58-63
 
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doi:10.1016/j.copbio.2003.11.001    How to Cite or Link Using DOI (Opens New Window)
Copyright © 2003 Published by Elsevier Science Ltd.

High-throughput phenomics: experimental methods for mapping fluxomes

Uwe Sauer E-mail The Corresponding Author

Institute of Biotechnology, ETH Zürich, CH-8093, Zürich, Switzerland

Available online 3 December 2003.

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Abstract

Many technologies have been developed to help explain the phenotypic consequences of genetic and/or environmental modifications in areas like functional genomics, pharmaceutical research and metabolic engineering. The missing link in contemporary functional analyses that focus on the analysis of cellular components is the capacity to directly observe functional units. By linking genes and proteins to higher level biological functions, the molecular fluxes through metabolic networks (the fluxome) determine the cellular phenotype. Quantitative monitoring of such whole network operations by methods of metabolic flux analysis, thus bridges the gap by providing a global perspective of the integrated regulation at the transcriptional, translational and metabolic level. This review highlights recent developments towards high-throughput flux analysis.

GC, gas chromatography; MALDI-TOF, matrix-assisted laser desorption ionization - time of flight; MS, mass spectrometry; NMR, nuclear magnetic resonance

Article Outline

• Introduction
• Established experimental approaches
• High-throughput 13C pattern analysis
• High-throughput fluxome mapping
• High-throughput cultivation systems
• Conclusions and outlook
• Update
• References and recommended reading
• Acknowledgements
• References



 
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