Data and Code Availability
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All sequencing data generated in this study are deposited at NCBI Gene Expression Omnibus (GEO) repository with accession numbers GSE172021 and GSE183321, and are publicly available as of the date of publications. Microscopy data reported in this paper will be shared by the lead contact upon request.
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The scripts used for the RNaseq data analysis and generating figures are available at https://github.com/Nhadadi/EAE_mouse_RNaseqAnalysis_multiTissue
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Any additional information required to reanalyze the data reported in this paper is available from the lead contact upon request.