Data and code availability
RNA-seq data for WT V. cholerae and a ΔhapR mutant grown to early stationary phase (NCBI: PRJNA810852) and Drosophila intestines infected with these two strains (NCBI: PRJNA811240) have been deposited in the NCBI repository. No code was generated as a part of these studies. Any additional information required to reanalyze the data reported in this paper is available from the lead contact upon request.