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Bioorganic & Medicinal Chemistry
Volume 15, Issue 16, 15 August 2007, Pages 5440-5447
 
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doi:10.1016/j.bmc.2007.05.056    How to Cite or Link Using DOI (Opens New Window)
Copyright © 2007 Elsevier Ltd All rights reserved.

Design, synthesis, and biological evaluation of LNA nucleosides as adenosine A3 receptor ligands

Jacob RavnCorresponding Author Contact Information, a, E-mail The Corresponding Author, Katrine Qvortrup, a, Christoph Rosenbohma and Troels Kocha

aSantaris Pharma A/S, Bøge Alle 3, DK-2970 Hørsholm, Denmark

Received 6 November 2006; 
revised 21 May 2007; 
accepted 23 May 2007. 
Available online 26 May 2007.

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Abstract

We have prepared a series of adenosine analogs based on the bicyclo[2.2.1]heptane scaffold of locked nucleic acid (LNA) and tested them for both agonist and antagonist activity at the adenosine A3 receptor. The design of these derivatives was based on the known A3 agonist IB-MECA and related compounds. Modifications thus include the 5′-uronamides and N6-(3-iodobenzyl) derivatives. In this way we have prepared analogs of known A3 agonists with the sugar ring restricted in an N-conformation. For comparison we have also prepared 2′-O-methyl derivatives of IB-MECA. The LNA nucleosides showed no agonist activity but some of them are potent antagonists. The 2′-O-methyl derivative of IB-MECA is an agonist with similar potency as the parent compound.

Graphical abstract

Locked nucleic acid (LNA) analogs of the A3AR agonist IB-MECA.


Keywords: LNA; Amino-LNA; Adenosine A3 receptor; IB-MECA

Article Outline

1. Introduction
2. Results and discussion
2.1. Chemistry
2.2. Adenosine A3 receptor activity
3. Experimental
3.1. General procedures
3.1.1. (1R,3R,4R,7S)-(7-Benzyloxy-3-(adenin-9-yl)-2,5-dioxabicyclo[2:2:1]hept-1-yl)-N-methylcarboxamide (23)
3.1.2. (1R,3R,4R,7S)-(7-Hydroxy-3-(adenin-9-yl)-2,5-dioxabicyclo[2:2:1]hept-1-yl)-N-methylcarboxamide (11)
3.1.3. (1S,3R,4R,7S)-7-Hydroxy-1-hydroxymethyl-3-(N6-(3-iodobenzyl)-adenin-9-yl)-2,5-dioxabicyclo[2:2:1]heptane (12)
3.1.4. (1R,3R,4R,7S)-(7-Hydroxy-3-(N6-(3-iodobenzyl)-adenin-9-yl)-2,5-dioxabicyclo[2:2:1]hept-1-yl)-N-methylcarboxamide (13)
3.1.5. (1R,3R,4R,7S)-7-Benzyloxy-5-tert-butoxycarbonyl-1-hydroxymethyl-3-(adenine-9-yl)-2-oxa-5-aza-bicyclo[2:2:1]heptane (25)
3.1.6. (1R,3R,4R,7S)-(7-Hydroxy-3-(adenin-9-yl)-2-oxa-5-azabicyclo[2:2:1]hept-1-yl)-N-methylcarboxamide (15)
3.1.7. (1S,3R,4R,7S)-7-Hydroxy-1-hydroxymethyl-3-(N6-(3-iodobenzyl)-adenin-9-yl)-2-oxa-5-azabicyclo[2:2:1]heptane (16)
3.1.8. (1R,3R,4R,7S)-7-Benzyloxy-5-tert-butoxycarbonyl-1-hydroxymethyl-3-(N6-(3-iodobenzyl)-adenine-9-yl)-2-oxa-5-aza-bicyclo[2:2:1]heptane (26)
3.1.9. (1R,3R,4R,7S)-(7-Hydroxy-3-(N6-(3-iodobenzyl)-adenin-9-yl)-2-oxa-5-azabicyclo[2:2:1]hept-1-yl)-N-methylcarboxamide (17)
3.1.10. 2′-O-Methyladenosine-N-methyl-5′-uronamide (19)
3.1.11. N6-(3-Iodobenzyl)-2′-O-methyladenosine (20)
3.1.12. N6-(3-Iodobenzyl)-2′-O-methyladenosine-N-methyl-5′-uronamide (21)
3.2. Human adenosine A3 receptor assay
3.3. Human adenosine A1 receptor assay
References







Bioorganic & Medicinal Chemistry
Volume 15, Issue 16, 15 August 2007, Pages 5440-5447
 
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