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Bioorganic & Medicinal Chemistry
Volume 13, Issue 6, 15 March 2005, Pages 1923-1929
 
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doi:10.1016/j.bmc.2005.01.024    
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Copyright © 2005 Elsevier Ltd All rights reserved.

Design and synthesis of an optimized positional scanning library of peptoids: identification of novel multidrug resistance reversal agents

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Isabel Masipa, Nuria Cortésa, Maria-José Abadb, Marisa Guardiolaa, Enrique Pérez-Payác, José Ferragutb, Antonio Ferrer-Montielb and Angel Messeguera, Corresponding Author Contact Information, E-mail The Corresponding Author

aDepartment of Biological Organic Chemistry, I.I.Q.A.B. (C.S.I.C.), J. Girona, 18, E-08034 Barcelona, Spain

bInstituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, Spain

cFundación Valenciana de Investigaciones Biomédicas, CSIC, E-46010 València, Spain


Received 25 October 2004; 
revised 10 January 2005; 
accepted 14 January 2005. 
Available online 5 February 2005.

Abstract

Herein is reported the optimized solid-phase synthesis of a library of 5,120 trimeric N-alkylglycines (peptoids) using the positional scanning format and the submonomer strategy. Diversity at the N-terminal position was generated from 20 commercially available primary amines, whereas 16 primary amines were employed for the middle and C-terminal positions of the trimers. Formation of undesirable side-products observed in a previous library synthesis (Humet, M. et al. J. Comb. Chem. 2003, 5, 597–605) was averted by restricting the use of primary amines functionalized with tertiary amino groups to the third amination step. Screening of the new library for the identification of chemosensitizers yielded two peptoids, compounds 1 and 2, with potent in vitro activity as multidrug resistance (MDR) reversal agents. The structures of the lead peptoids are consistent with a pharmacophore model generated from the interaction of various known inhibitors with the MDR-implicated transmembrane glycoprotein P-gp.

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Keywords: Combinatorial libraries; Peptoids; Positional scanning; Chemosensitizers

Article Outline

1. Introduction
2. Results and discussion
2.1. Design and synthesis of the new library of N-alkylglycines
2.2. Screening of the library of N-alkylglycine trimers for the identification of TRPV1 receptor channel antagonists
2.3. Screening of the library of N-alkylglycine trimers for the identification of chemosensitizers
2.4. Synthesis and biological activity of peptoids retrieved from the deconvolution
2.5. Modelling studies
3. Experimental
3.1. General
3.2. Synthesis of the peptoid library
3.3. Synthesis of individual peptoids
3.4. Daunomycin accumulation assays
3.5. In vitro proliferation assays
3.6. Molecular modelling studies
Acknowledgements
References







Corresponding Author Contact InformationCorresponding author. Tel.: +34 93 4006121; fax: +34 93 2045904

Bioorganic & Medicinal Chemistry
Volume 13, Issue 6, 15 March 2005, Pages 1923-1929
 
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