doi:10.1016/j.bios.2008.05.006
Copyright © 2008 Elsevier B.V. All rights reserved.
Detection of DNA and proteins using amorphous silicon ion-sensitive thin-film field effect transistors
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D. Gonçalvesa, b, D.M.F. Prazeresb, c, V. Chua and J.P. Condea, c,
, 
aINESC Microsistemas e Nanotecnologias (INESC-MN), Rua Alves Redol 9, 1000-029 Lisbon, Portugal
bInstitute for Biotechnology and Bioengineering (IBB), Center of Biological & Chemical Engineering, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisbon, Portugal
cDepartment of Chemical and Biological Engineering, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisbon, Portugal
Received 18 December 2007;
revised 1 May 2008;
accepted 20 May 2008.
Available online 27 May 2008.
Abstract
Amorphous silicon-based ion-sensitive field-effect transistors (a-Si:H ISFETs) are used for the label-free detection of biological molecules. The covalent immobilization of DNA, followed by DNA hybridization, and of the surface adsorption of oligonucleotides and proteins were detected electronically by the a-Si:H ISFET. The ISFET measurements are performed with an external Ag/AgCl microreference electrode immersed in 100 mM phosphate buffer electrolyte with pH 7.0. Threshold voltage shifts in the transfer curve of the ISFETs are observed resulting from successive steps of surface chemical functionalization, covalent DNA attachment to the functionalized surface, surface blocking, and hybridization with a complementary target. The surface sensitivity achieved for DNA oligonucleotides is of the order of 1 pmol/cm2. Point-of-zero charge estimations were made for the functionalized surfaces and for the device surface after DNA immobilization and hybridization. The results show a correlation between the changes in the point-of-zero charge and the shift observed in the threshold voltage of the devices. Electronic detection of adsorbed proteins and DNA is also achieved by monitoring the shifts of the threshold voltage of the ISFETs, with a sensitivity of approximately 50 nM.
Keywords: Thin film transistors; ISFET; a-Si:H; Biosensor; Molecular charge
Fig. 1. (a) Schematic diagram of a-Si:H ISFET structure fabricated on a glass substrate and (b) picture of packaged chip. The external Ag/AgCl electrode is immersed in a drop of 50–100 μL phosphate buffer 100 mM, pH 7.0. The source (S), drain (D) and gate (G) electrodes are identified.
Fig. 2. Schematic diagram of the DNA probe immobilization on the ISFET surface. Chemical functionalization steps: (1) cleaning and hydroxylation with cholic acid; (2) silanization with APTES; (3) functionalization with sulfo-EMCS spacer arm molecule; (4) DNA probe immobilization; (5) blocking of the unreacted immobilization sites with BSA (pre-hybridization). The BSA protein is not to scale.
Fig. 3. a-Si:H ISFET transfer curves obtained after each chemical reaction step: CA—after cholic acid washing (initial state); FUNCT—functionalization, involving silanization and reaction with spacer arm; IMMOB—19-nt DNA probe covalent immobilization; PREHYB—surface blocking and pre-hybridization with BSA; HYB—DNA complementary target hybridization. The inset shows an enlargement of the transfer curve.
Fig. 4. (a) Gate voltage shift, ΔVG, measured at 30 pA, relative to the initial state (cholic acid) after chemical reaction steps. DNA complementary hybridization detection is shown. The inset in (a) shows the comparison of the shifts upon complementary and 50%-mismatch hybridization, as well as the corresponding fluorescence microscopy micrographs. (b) Point-of-zero charge (pHpzc) of the chemically treated surfaces after each surface modification step.
Fig. 5. Threshold voltage shift of the a-Si:H ISFET relative to the initial state due to the unspecific adsorption of biomolecules. The shift is plotted as a function of the concentration of biomolecules in solution: (a) 19-nt oligonucleotides; (b) horseradish peroxidase, HRP; (c) green fluorescent protein, GFP. The symbols correspond to the average of two independent measurements and the error bars to the respective standard deviation. The lines are Langmuir isotherm fits to the data points and the corresponding calculated parameters are shown.
Fig. 6. Schematic illustration of biomolecules adsorption at the surface of ISFETs and expected VT shift: (a) negatively charged biomolecules and distribution of positive counter-ions; (b) positively charged biomolecules and distribution of negative counter-ions. The Debye length is indicated by the dotted line (λD = 0.66 nm).

Corresponding author at: INESC Microsistemas e Nanotecnologias (INESC-MN) and IN - Institute of Nanoscience and Nanotechnology, Rua Alves Redol 9, 1000-029 Lisbon, Portugal. Tel.: +351 213100237; fax: +351 213145843.