Copyright © 2006 Elsevier Inc. All rights reserved.
Bacterial Cycling of Methyl Halides
Available online 18 September 2007.
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Article Outline
- I. Introduction
- A. Role of Methyl Halides in Atmospheric Chemistry and as Ozone-Depleting Compounds
- B. Biogeochemical Cycle of Monohalomethanes
- C. Anthropogenic Sources
- D. Natural Chemical Sources and Sinks
- E. Natural Biological Sources
- F. Natural Biological Sinks
- G. Stable Isotope Mass Balances and Fractionation
- II. Methyl Halide-Degrading Organisms
- A. Bacterial Degradation of Methyl Halides by Methanotrophs and Nitrifiers
- B. Diversity and Distribution of Bacteria Capable of Growth on Methyl Halides as a Carbon and Energy Source
- III. Biochemistry and Genetics of Methyl Halide Degradation
- A. Metabolism of Methyl Halides by Bacterial Isolates
- B. The CmuA Pathway of Methyl Halide Degradation in M. chloromethanicum Strain CM4
- C. Cloning and Sequencing of cmu Gene Clusters
- D. Mutational and Transcriptional Analysis of cmu Genes of H. chloromethanicum CM2
- E. Evidence for Operation of the CmuA Pathway in MeCl- and MeBr-Degrading Bacterial Isolates
- F. Alternative Methyl Halide Degradation Pathways
- IV. Microbial Ecology of Methyl Halide-Degrading Bacteria
- A. Development of Functional Gene Markers for CmuA Pathway Methylotrophs
- B. Stable Isotope Probing of Methyl Halide Degradation in Soils
- 1. Stable Isotope Probing of Agricultural Soils
- 2. Stable Isotope Probing of Woodland and Forest Soils
- C. Marine Methyl Halide Degradation
- V. Potential Applications for Bioremediation Using Methyl Halide-Oxidizing Bacteria
- A. Reducing Fugitive MeBr Emissions
- B. Previous Efforts to Reduce MeBr Emissions
- C. Bioremediation Using Methyl Halide-Oxidizing Bacteria
- VI. Outlook
- A. Genomics of Methyl Halide-Degrading Bacteria
- B. Contribution of Alternative Pathways of Methyl Halide Degradation
- C. Evolutionary Aspects and Role of Methyl Halides as Substrates in the Environment
- Acknowledgements
- References







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