Copyright © 1992 Published by Elsevier Science B.V.
Exons I and VII of the gene (Ker10) encoding human keratin 10 undergo structural rearrangements within repeats
Received 24 September 1991;
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Abstract
A genomic fragment containing the K51 gene previously isolated from a rat genomic library by hybridization with the v-mos probe in nonstringent conditions [Chumakov et al., Dokl. Akad. Nauk SSSR 290 (1986) 1252–1254], resembles a human keratin type-I-encoding gene [Shvets et al., Mol. Biol. 24 (1990) 663–677]. This genomic clone, K51, has been used as a probe to search for related human genes. A recombinant clone, HK51, with a 1.5-kb insert, was isolated from a human embryonic skin cDNA library, and its nucleotide (nt) sequence was determined. Analysis has shown that the cloned cDNA encodes human keratin 10 (Ker 10). All presently known nt sequences of the human Ker 10-encoding gene (Ker10) are not identical. Differences are concentrated in the 5′-end of the first exon and in the middle of the seventh exon within repeats. In spite of structural rearrangements in two of eight exons, the reading frame and position of the stop codon are preserved. The genetic rearrangements cause changes in hydrophobicity profiles of the N and C termini of Ker10. It was also noticed that insertion of one nt leads to the formation of an unusual 3′-end of the transcript.
Author Keywords: Recombinant DNA; cDNA sequence; 3′-end formation
Abbreviations: aa, amino acid(s); bp, base pair(s); ExoIII, exonuclease III; kb, kilobase(s) or 1000 bp; Ker10, human keratin 10; Ker10, gene (DNA) encoding Ker10; K51, rat gene (DNA probe) encoding K51 keratin; nt, nucleotide(s); ORF, open reading frame; PCR, polymerase chain reaction; PEG, polyethylene glycol; S, sedimentation constant







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