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Genetic diversity and population structure of blue-crested lizard, Calotes mystaceus Duméril & Bibron, 1837 (Squamata: Agamidae) in Thailand

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Abstract

The blue-crested lizard, Calotes mystaceus Duméril & Bibron, 1837, is listed as a protected wild animal in Thailand. Its population is likely to be dramatically reduced due to massive hunting in several areas in this country. Basic information on its population genetics is therefore needed to facilitate its conservation. Thus, in this study we investigated the mitochondrial cytochrome c oxidase subunit 1 (CO1) sequence variation of 238 individual C. mystaceus from 42 different geographical localities of the north, west, central, east and northeast regions of Thailand. High genetic diversity and genetic differentiation at the intrapopulation and interpopulation levels was observed. We detected 63 unique haplotypes and 12 common/shared haplotypes. The phylogenetic analysis reveals two major lineages, I and II. These two lineages are separated by mountain ranges, which play an important role as natural barriers blocking gene flow. Our finding reveal at least two cryptic lineages represented in C. mystaceus populations in Thailand. However, a comprehensive investigation of the morphology, biology, ecology and genetic diversity of C. mystaceus in other regions within its area of distribution is needed.

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References

  • Bandelt H. J., Forster P. and Rohl A. 1999 Median-joining networks for inferring intraspecific phylogenies. Mol. Biol. Evol. 16, 37–48.

    Article  CAS  PubMed  Google Scholar 

  • Bennett D. 1999 Expedition field techniques: reptiles and amphibians, pp. 94. Geography Outdoors, London, UK.

    Google Scholar 

  • Chan-ard T., Parr J. W. K. and Nabhitabhata J. 2015 A field guide to the reptiles of Thailand, pp. 314. Oxford University Press, New York, USA.

  • Das I. 2010 A field guide to the reptiles of Thailand and South-East Asia, pp. 376. Tien Wah Press, Hong Kong.

  • Excoffier L. and Lischer H. E. 2010 Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Resour. 10, 564–567.

    Article  PubMed  Google Scholar 

  • Hartmann T., Geissler P., Poyarkov N., Ihlow F., Galoyan E., Rödder D. et al. 2013 A new species of the genus Calotes Cuvier, 1817 (Squamata: Agamidae) from southern Vietnam. Zootaxa 3599, 246–260.

    Article  PubMed  Google Scholar 

  • Huang Y., Guo X., Ho S. Y. W., Shi H., Li J., Li J. et al. 2013 Diversification and demography of the Oriental garden lizard (Calotes versicolor) on Hainan Island and the adjacent mainland. PLoS One 8, e64754.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Irwin D. E. 2002 Phylogeographic breaks without geographic barriers to gene flow. Evolution 56, 2383–2394.

    Article  PubMed  Google Scholar 

  • Ivanova N. V., de Waard J. and Hebert P. D. N. 2006 An inexpensive, automation-friendly protocol for recovering high-quality DNA. Mol. Ecol. Resour. 6, 998–1002.

    Article  CAS  Google Scholar 

  • Laojumpon C., Suteethorn S. and Lauprasert K. 2012 Morphological variation of truncate-snouted burrowing frog (Glyphoglossus molossus) of Thailand. Proceedings of the 4th Science Research Conference. pp. 56–61. Naresuan University, Thailand.

  • Larkin M. A., Blackshields G., Brown N. P., Chenna R., McGettigan P. A., McWilliam H. et al. 2007 Clustal W and Clustal X version 2.0. Bioinformatics 23, 2947–2948.

    Article  CAS  PubMed  Google Scholar 

  • Librado P. and Rozas J. 2009 DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25, 1451–1452.

    Article  CAS  PubMed  Google Scholar 

  • Lukoschek V., Osterhage J. L., Karns D. R., Murphy J. C. and Voris H. K. 2011 Phylogeography of the Mekong mud snake (Enhydris subtaeniata): the biogeographic importance of dynamic river drainages and fluctuating sea levels for semiaquatic taxa in Indochina. Ecol. Evol. 1, 330–342.

    Article  PubMed  PubMed Central  Google Scholar 

  • Nazarov R., Poyarkov N. A., Orlov N. L., Nguyen N. S., Milto K. D., Martynov A. A. et al. 2014 A review of genus Cyrtodactylus (Reptilia: Sauria: Gekkonidae) in fauna of Laos with description of four new species. Proc. Zool. Inst. Russ. Acad. Sci.  318, 391–423.

  • Nylander J. A. A. 2008 MrModeltest v2.3 Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Sweden, Europe.

  • Patawang I., Tanomtong A., Chuaynkern Y., Chuaynkern C. and Duengkae P. 2015 Karyotype homology between Calotes versicolor and C. mystaceus (Squamata, Agamidae) from northeastern Thailand. Nucleus 2, 117–123.

    Article  Google Scholar 

  • Ronquist F. and Huelsenbeck J. P. 2003 MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572–1574.

    Article  CAS  PubMed  Google Scholar 

  • Rutherford P. L. and Gregory P. T. 2003 Habitat use and movement patterns of northern alligator lizards (Elgaria coerulea) and western skinks (Eumeces skiltonianus) in southeastern British Columbia. J. Herpetol. 37, 98–106.

  • Siriwut W., Edgecombe G. D., Sutcharit C. and Panha S. 2015 The centipede genus Scolopendra in Mainland Southeast Asia: molecular phylogenetics, geometric morphometrics and external morphology as tools for species delimitation. PLoS One 10, e0135355.

    Article  PubMed  PubMed Central  Google Scholar 

  • Tamura K., Peterson D., Peterson N., Stecher G., Nei M. and Kumar S. 2011 MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731–2739.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgements

This research was financially supported by Mahasarakham University through the Biodiversity and Conservation Research Unit of fiscal year 2014.

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Correspondence to Chairat Tantrawatpan.

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[Saijuntha W., Khumkratok S., Wongpakam K., Thanonkeo S., Senakhun C., Appamaraka S., Yodsiri S., Thongnetr W., Pilap W., Kongbuntad W., Tawong W., Agatsuma T., Petney T. N. and Tantrawatpan C. 2017 Genetic diversity and population structure of blue-crested lizard, Calotes mystaceus Duméril & Bibron, 1837 (Squamata: Agamidae) in Thailand. J. Genet. 96, xx–xx]

Corresponding editor: Indrajit Nanda

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Saijuntha, W., Khumkratok, S., Wongpakam, K. et al. Genetic diversity and population structure of blue-crested lizard, Calotes mystaceus Duméril & Bibron, 1837 (Squamata: Agamidae) in Thailand. J Genet 96, 377–382 (2017). https://doi.org/10.1007/s12041-017-0767-x

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