Abstract
Alzheimer’s disease (AD) is the most common neurological ailment worldwide. Its process comprises the unique aggregation of extracellular senile plaques composed of amyloid-beta (Aβ) in the brain. Aβ42 is the most neurotoxic and aggressive of the Aβ42 isomers released in the brain. Despite much research on AD, the complete pathophysiology of this disease remains unknown. Technical and ethical constraints place limits on experiments utilizing human subjects. Thus, animal models were used to replicate human diseases. The Drosophila melanogaster is an excellent model for studying both physiological and behavioural aspects of human neurodegenerative illnesses. Here, the negative effects of Aβ42-expression on a Drosophila AD model were investigated through three behavioural assays followed by RNA-seq. The RNA-seq data was verified using qPCR. AD Drosophila expressing human Aβ42 exhibited degenerated eye structures, shortened lifespan, and declined mobility function compared to the wild-type Control. RNA-seq revealed 1496 genes that were differentially expressed from the Aβ42-expressing samples against the control. Among the pathways that were identified from the differentially expressed genes include carbon metabolism, oxidative phosphorylation, antimicrobial peptides, and longevity-regulating pathways. While AD is a complicated neurological condition whose aetiology is influenced by a number of factors, it is hoped that the current data will be sufficient to give a general picture of how Aβ42 influences the disease pathology. The discovery of molecular connections from the current Drosophila AD model offers fresh perspectives on the usage of this Drosophila which could aid in the discovery of new anti-AD medications.
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Data Availability
The data that support the findings of this study are openly available in NCBI SRA (BioProject ID: PRJNA921963): https://www.ncbi.nlm.nih.gov/bioproject/PRJNA921963. Ascension numbers for Control (Actin5C-OreR) samples are SRR23047823, SRR23047822 and SRR23047821. Ascension numbers for Aβ42 (Actin5C-Aβ42) samples are SRR23047820, SRR23047819 and SRR23047818.
Abbreviations
- AD:
-
Alzheimer’s disease
- Aβ:
-
Amyloid-beta
- APP:
-
Amyloid precursor protein
- AMPs:
-
Antimicrobial peptides
- APLP2:
-
APP-like protein 2
- BP:
-
Biological processes
- CAFE:
-
CApillary FEeder
- CC:
-
Cellular components
- cDNA:
-
Complementary DNA
- CYP:
-
Cytochrome P450
- DEGs:
-
Differentially expressed genes
- GMR-GAL4:
-
Glass multiple reporter-gal4
- GO:
-
Gene ontology
- HSP:
-
Heat shock protein
- KEGG:
-
Kyoto Encyclopedia of Genes and Genomes
- log2FC:
-
Log2foldchange
- MF:
-
Molecular functions
- padj:
-
Adjusted P values
- P-score:
-
Phenotypic score
- qRT-PCR:
-
Quantitative real-time PCR
- RNA-seq:
-
RNA-sequencing
- REP:
-
Rough eye phenotype
- SEM:
-
Scanning electron microscopy
- UPS:
-
Ubiquitin-proteasome system
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Acknowledgements
We would like to thank all our collaborators and colleagues for the discussion and the work conducted in this lab.
Funding
This work was supported by the Ministry of Higher Education Malaysia for Transdisciplinary Research Grant Scheme (TRGS) for the project titled “Elucidating the molecular pathway of THICAPA and POET using Drosophila melanogaster Alzheimer’s disease models” (TRGS/1/2020/USM/02/3/1).
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Florence Hui Ping Tan contributed to the conceptualization, methodology, formal analysis, investigation, writing (original draft), writing (review and editing), and visualization of the manuscript. Nazalan Najimudin contributed to the conceptualization, methodology, resources, writing (review & editing), supervision, project administration, and funding acquisition of the research. Shaharum Shamsuddin contributed to the supervision, project administration, and funding acquisition of the research. Azalina Zainuddin contributed to the supervision, project administration, and funding acquisition of the research. Ghows Azzam contributed to the conceptualization, methodology, resources, writing (review and editing), supervision, project administration, and funding acquisition of the research.
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Highlights
• Aβ42 expression in the Drosophila eye resulted in severe rough eye phenotype.
• Drosophila melanogaster–expressing Aβ42 exhibited shortened lifespan.
• Aβ42-expressing Drosophila melanogaster had impaired climbing abilities.
• From the RNA-seq analysis, AD samples showed 1496 DEGs compared to control.
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Tan, F.H.P., Azzam, G., Najimudin, N. et al. Behavioural Effects and RNA-seq Analysis of Aβ42-Mediated Toxicity in a Drosophila Alzheimer’s Disease Model. Mol Neurobiol 60, 4716–4730 (2023). https://doi.org/10.1007/s12035-023-03368-x
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DOI: https://doi.org/10.1007/s12035-023-03368-x