Abstract
A multi-disciplinary approach is adopted in the present work towards investigating bio-cemented geo-materials which extends from sample preparation, to microstructural inspection and mechanical behaviour characterization. We suggest a new way to induce “cell-free” soil bio-cementation along with a comprehensive description of bio-improved mechanical and microstructural properties. We utilize the soil bacterium Sporosarcina Pasteurii in freeze-dried, powder—instead of vegetative—, state and determine overall reaction rates of “cell-free” microbial-induced calcite (CaCO3) precipitation (MICP). We further investigate strength and stiffness parameters of three base geo-materials which are subjected to MICP under identical external bio-treatment conditions. Different trends in the mechanical response under unconfined and drained triaxial compression are obtained for fine-, medium- and coarse-grained sands for similar range of final CaCO3 contents. Pre- and post-yield dilatancy–stress relationships are obtained revealing the contribution of dilatancy in the achievement of peak strength. Medium-grained sand yields higher dilatancy rates and increased peak strength with respect to fine-grained sand. Further, insight into the bio-cemented material’s fabric is provided through scanning electron microscopy, time-lapse video microscopy and X-ray micro-computed tomography with subsequent 3D reconstruction of the solid matrix. A qualitative description of the observed precipitation behaviours is coupled with quantified microscopic data referring to the number, sizes, orientations and purity of CaCO3 crystals. Results reveal that MICP adapts differently to the adopted base materials. Crystalline particles are found to grow bigger in the medium-grained base material and yield more homogenous spatial distributions. Finally, a new workflow is suggested to ultimately determine the crucial contact surface between calcite bonds and soil grains through image processing and 3D volume reconstruction.
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Abbreviations
- MICP:
-
Microbial-induced calcite precipitation
- UCS:
-
Unconfined compressive strength
- EC:
-
Electrical conductivity (mS/cm)
- Rpm:
-
Revolutions per minute
- OD600 :
-
Optical density measured at 600 nm
- PVC:
-
Polyvinyl chloride
- PDMS:
-
Polydimethylsiloxane
- SEM:
-
Scanning electron microscopy
- BSE:
-
Back-scattered electron
- GSD:
-
Grain size distribution
- 3D:
-
Three dimensional
- μ-CT:
-
Micro-computed tomography
- CTC:
-
Conventional triaxial compression
- \(\sigma_{1}^{\prime }\) :
-
Vertical effective stress
- ε 1 :
-
Vertical strain
- dε vol :
-
Incremental volumetric strain
- dε q :
-
Incremental deviatoric strain
- D :
-
Dilatancy rate
- D*:
-
Theoretical dilatancy rate
- M :
-
Slope of the critical state line
- Η :
-
Stress ratio
- η max :
-
Maximum stress ratio
- m c :
-
Parameter related to interparticle cohesion
- c :
-
Interparticle cohesion
- \(p^{\prime }\) :
-
Mean effective stress
- E i :
-
Initial elastic modulus
- K :
-
Janbu modulus
- P α :
-
Atmospheric pressure
- N :
-
Exponent
- φ :
-
Particle orientation phi
- θ :
-
Particle orientation theta
- \(\sigma_{3}^{\prime }\) :
-
Effective confining pressure
- q peak :
-
Peak deviatoric stress
- q res :
-
Residual deviatoric stress
- E ur :
-
Unloading–reloading elastic modulus
- D max :
-
Maximum dilatancy rate
- D 50 :
-
Particle diameter at which 50% of the sample's mass is comprised of particles with a diameter less than this value
- D 10 :
-
Particle diameter at which 10% of the sample's mass is comprised of particles with a diameter less than this value
- e min :
-
Minimum void ratio
- e max :
-
Maximum void ratio
- C c :
-
Coefficient of curvature
- C u :
-
Uniformity coefficient
References
Achal V, Mukherjee A, Basu PC, Reddy MS (2009) Lactose mother liquor as an alternative nutrient source for microbial concrete production by Sporosarcina pasteurii. J Ind Microbiol Biotechnol 36(3):433–438
Al Qabany A, Soga K (2013) Effect of chemical treatment used in MICP on engineering properties of cemented soils. Géotechnique 63(4):331–339
Altuhafi FN, Coop MR, Georgiannou VN (2016) Effect of particle shape on the mechanical behavior of natural sands. J Geotech Geoenviron Eng 142(12):04016071
Avizo user’s guide. FEI company—thermoscientific (2009)
Bolton MD (1986) The strength and dilatancy of sands. Geotechnique 36(1):65–78
Cardoso R, Pires I, Duarte SO, Monteiro GA (2018) Effects of clay’s chemical interactions on biocementation. Appl Clay Sci 156:96–103
Carmona JP, Oliveira PJ, Lemos LJ (2016) Biostabilization of a sandy soil using enzymatic calcium carbonate precipitation. Procedia Eng 31(143):1301–1308
Cheng L, Cord-Ruwisch R, Shahin MA (2013) Cementation of sand soil by microbially induced calcite precipitation at various degrees of saturation. Can Geotech J 50(1):81–90
Cheng L, Shahin M, Cord-Ruwisch R (2014) Bio-cementation of sandy soil using microbially induced carbonate precipitation for marine environments. Géotechnique 64(12):1010–1013
Cheng L, Shahin MA, Mujah D (2016) Influence of key environmental conditions on microbially induced cementation for soil stabilization. J Geotech Geoenviron Eng 143(1):04016083
Choi SG, Wu S, Chu J (2016) Biocementation for sand using an eggshell as calcium source. J Geotech Geoenviron Eng 142(10):06016010
Cui MJ, Zheng JJ, Zhang RJ, Lai HJ, Zhang J (2017) Influence of cementation level on the strength behaviour of bio-cemented sand. Acta Geotech 12(5):971–986
Cunningham AB, Gerlach R, Spangler L, Mitchell AC, Parks S, Phillips A (2011) Reducing the risk of well bore leakage of CO2 using engineered biomineralization barriers. Energy Procedia 4:5178–5185
Dadda A, Geindreau C, Emeriault F, du Roscoat SR, Garandet A, Sapin L, Filet AE (2017) Characterization of microstructural and physical properties changes in biocemented sand using 3D X-ray microtomography. Acta Geotechn 12(5):955–970
Dadda A, Geindreau C, Emeriault F, Esnault Filet A, Garandet A (2018) Influence of the microstructural properties of biocemented sand on its mechanical behavior. Int J Numer Anal Methods Geomech 43(2):568–577
DeJong JT, Gomez MG, Waller JT, Viggiani G (2017) Influence of bio-cementation on the shearing behavior of sand using X-ray computed tomography. In: Geotechnical frontiers 2017, pp 871–880
Druckrey AM, Alshibli KA, Al-Raoush RI (2016) 3D characterization of sand particle-to-particle contact and morphology. Comput Geotech 74:26–35
El Mountassir G, Minto JM, van Paassen LA, Salifu E, Lunn RJ (2018) Applications of microbial processes in geotechnical engineering. In: Advances in applied microbiology, vol 104. Academic Press, pp 39–91
Filet AE, Gadret JP, Loygue M, Borel S (2012) Biocalcis and its applications for the consolidation of sands. In: Grouting and deep mixing, pp 1767–1780
Gai X, Sánchez M (2018) An elastoplastic mechanical constitutive model for microbially mediated cemented soils. Acta Geotech. https://doi.org/10.1007/s11440-018-0721-y
Gajo A, Cecinato F, Hueckel T (2015) A micro-scale inspired chemo-mechanical model of bonded geomaterials. Int J Rock Mech Min Sci 80:425–438
Gajo A, Cecinato F, Hueckel T (2019) Chemo-mechanical modeling of artificially and naturally bonded soils. Geomech Energy Environ 18:13–29
Gao Y, Hang L, He J, Chu J (2018) Mechanical behaviour of biocemented sands at various treatment levels and relative densities. Acta Geotech. https://doi.org/10.1007/s11440-018-0729-3
Gomez MG, DeJong JT (2017) Engineering properties of bio-cementation improved sandy soils. In: Grouting 2017, pp 23–33
Harkes MP et al (2010) Fixation and distribution of bacterial activity in sand to induce carbonate precipitation for ground reinforcement. Ecol Eng 36(2):112–117
Hausinger RP (2013) Biochemistry of nickel. Springer, New York
Janbu, N., 1963, October. Soil compressibility as determined by oedometer and triaxial tests. In: Proceedings of the European conference on soil mechanics and foundation engineering, vol 1, pp 19–25
Jiang N-J, Soga K (2017) The applicability of microbially induced calcite precipitation (MICP) for internal erosion control in gravel–sand mixtures. Géotechnique 67(1):42–55. https://doi.org/10.1680/jgeot.15.P.182
Jiménez-Martínez J, Anna PD, Tabuteau H, Turuban R, Borgne TL, Méheust Y (2015) Pore-scale mechanisms for the enhancement of mixing in unsaturated porous media and implications for chemical reactions. Geophys Res Lett 42(13):5316–5324
Lauchnor EG et al (2015) Whole cell kinetics of ureolysis by Sporosarcina pasteurii. J Appl Microbiol 118(6):1321–1332
Li XS, Dafalias YF (2000) Dilatancy for cohesionless soils. Geotechnique 50:449–460
Lian J, Xu H, He X, Yan Y, Fu D, Yan S, Qi H (2018) Biogrouting of hydraulic fill fine sands for reclamation projects. Mar Georesour Geotechnol. https://doi.org/10.1080/1064119X.2017.1420115
Lin H, Suleiman MT, Brown DG, Kavazanjian E Jr (2015) Mechanical behavior of sands treated by microbially induced carbonate precipitation. J Geotech Geoenviron Eng 142:04015066
Mahawish A, Bouazza A, Gates WP (2018a) Factors affecting the bio-cementing process of coarse sand. In: Proceedings of the Institution of Civil Engineers–Ground Improvement, pp 1–12
Mahawish A, Bouazza A, Gates WP (2018) Effect of particle size distribution on the bio-cementation of coarse aggregates. Acta Geotech 13(4):1019–1025
Mahawish A, Bouazza A, Gates WP (2018) Improvement of coarse sand engineering properties by microbially induced calcite precipitation. Geomicrobiol J 35(10):887–897
Mortensen BM, Haber MJ, DeJong JT, Caslake LF, Nelson DC (2011) Effects of environmental factors on microbial induced calcium carbonate precipitation. J Appl Microbiol 111(2):338–349
Nafisi A, Montoya BM (2018) A new framework for identifying cementation level of MICP-treated sands. In: IFCEE 2018, pp 37–47
Porcino DD, Marcianò V (2017) Bonding degradation and stress–dilatancy response of weakly cemented sands. Geomech Geoeng 12(4):221–233
Rowshanbakht K, Khamehchiyan M, Sajedi RH, Nikudel MR (2016) Effect of injected bacterial suspension volume and relative density on carbonate precipitation resulting from microbial treatment. Ecol Eng 89:49–55
Schnaid F, Prietto PD, Consoli NC (2001) Characterization of cemented sand in triaxial compression. J Geotech Geoenviron Eng 127(10):857–868
Sun X, Miao L, Tong T, Wang C (2018) Study of the effect of temperature on microbially induced carbonate precipitation. Acta Geotech 1–12
Terzis D, Laloui L (2017) On the application of microbially induced calcite precipitation for soils: a multiscale study. In: Ferrari A, Laloui L (eds) Advances in laboratory testing and modelling of soils and shales. Springer, Cham, pp 388–394
Terzis D, Laloui L (2018) 3-D micro-architecture and mechanical response of soil cemented via microbial-induced calcite precipitation. Sci Rep 8(1):1416
Terzis D, Bernier-Latmani R, Laloui L (2016) Fabric characteristics and mechanical response of bio-improved sand to various treatment conditions. Géotech Lett 6(1):50–57
van Paassen LA (2009) Biogrout, ground improvement by microbially induced carbonate precipitation. Ph.D. thesis, Delft University of Technology, Netherlands
van Paassen LA, Ghose R, van der Linden TJ, van der Star WR, van Loosdrecht MC (2010) Quantifying biomediated ground improvement by ureolysis: large-scale biogrout experiment. J Geotech Geoenviron Eng 136(12):1721–1728
Venuleo S et al (2016) Microbially induced calcite precipitation effect on soil thermal conductivity. Geotechnique Letters. https://doi.org/10.1680/jgele.15.00125
Whiffin VS (2004) Microbial CaCO3 precipitation for the production of biocement. Dissertation, Murdoch University, 2004, p 35, 147
Widdel F (2007) Theory and measurement of bacterial growth. Di dalam Grundpraktikum Mikrobiologie 4(11):1–11
Yoon JH, Lee KC, Weiss N, Kho YH, Kang KH, Park YH (2001) Sporosarcina aquimarina sp. nov., a bacterium isolated from seawater in Korea, and transfer of Bacillus globisporus (Larkin and Stokes 1967), Bacillus psychrophilus (Nakamura 1984) and Bacillus pasteurii (Chester 1898) to the genus Sporosarcina as Sporosarcina globispora comb. nov., Sporo-sarcina psychrophila comb. nov. and Sporosarcina pasteurii comb. nov., and emended description of the genus Sporosarcina. Int J System Evolut Microbiol 51:1079–1086
Zhang J, Salgado R (2010) Stress-dilatancy relation for Mohr-Coulomb soils following a non-associated flow rule. Geotech 60(3):223–226
Acknowledgements
The authors would like to acknowledge the support of the Lombardi Foundation and Prof. Pietro de Anna from the Geosciences Faculty of the University of Lausanne (UNIL) for his contribution in conducting the time-lapse video microscopy analysis. Additionally, the authors express their sincere thanks to the Swiss National Science Foundation (SNSF) (Grant 200021_140246) and Swiss Federal Commission for Scholarships for Foreign Students (Swiss Government Excellence Scholarship ESKAS-Nr: 2014·0276) for their financial support.
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Terzis, D., Laloui, L. Cell-free soil bio-cementation with strength, dilatancy and fabric characterization. Acta Geotech. 14, 639–656 (2019). https://doi.org/10.1007/s11440-019-00764-3
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DOI: https://doi.org/10.1007/s11440-019-00764-3