Abstract
To explore the possibility of using the graphene moiré superstructure formed on Ru(0001) (g/Ru(0001)) as a template to self-assemble super-lattices of metal nanoparticles as model catalysts, it is desirable to know the minimum-energy adsorption sites, adsorption energies, and diffusion properties of small metal species on this surface. Toward that end, density functional theory calculations have been carried out to investigate the adsorption and diffusion of 18 4d (Y–Ag) and 5d (La–Au) transition metal adatoms on g/Ru(0001), using small surface models representing different regions of the g/Ru(0001) surface. For each adatom, adsorption is the strongest in the fcc region and the weakest in the mound region of the moiré. Diffusion within the fcc region is facile for most adatoms, but an additional barrier is imposed by the corrugation of the graphene moiré for traversing between neighboring fcc regions. Overall, the earlier 4d and 5d metal adatoms have stronger adsorption energies and higher diffusion barriers on g/Ru(0001) than the later ones. The results are then interpreted to provide a better understanding of the conditions necessary to achieve dense super-lattices of monodisperse metal clusters on g/Ru(0001).
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References
Aiken JD, Finke RG (1999) J Mol Catal A-Chem 145:1
Wilcoxon JP, Abrams BL (2006) Chem Soc Rev 35:1162
Heiz U, Sanchez A, Abbet S, Schneider WD (2000) Chem Phys 262:189
Argo AM, Gates BC (2003) J Phys Chem B 107:5519
Lee S, Fan C, Wu T, Anderson SL (2004) J Am Chem Soc 126:5682
Vajda S, Pellin MJ, Greeley JP, Marshall CL, Curtiss LA, Ballentine GA, Elam JW, Catillon-Mucherie S, Redfern PC, Mehmood F, Zapol P (2009) Nat Mater 8:213
Gates BC (1995) Chem Rev 95:511
Abbet S, Judai K, Klinger L, Heiz U (2002) Pure Appl Chem 74:1527
Liu L, Zhou Z, Guo Q, Yan Z, Yao Y, Goodman DW (2011) Surf Sci 605:L47
Becker C, Wandelt K (2009) Top Curr Chem 287:45
Buchsbaum A, De Santis M, Tolentino HCN, Schmid M, Varga P (2010) Phys Rev B 81:115420
Uhl A, Lei Y, Khosravian H, Becker C, Wandelt K, Adams RD, Trenary M, Meyer RJ (2010) J Phys Chem C 114:17062
Nilius N, Rienks EDL, Rust HP, Freund HJ (2005) Phys Rev Lett 95:066101
Brihuega I, Michaelis CH, Zhang J, Bose S, Sessi V, Honolka J, Schneider MA, Enders A, Kern K (2008) Surf Sci 602:L95
N’Diaye AT, Bleikamp S, Feibelman PJ, Michely T (2006) Phys Rev Lett 97:215501
N’Diaye AT, Gerber T, Busse C, Myslivecek J, Coraux J, Michely T (2009) New J Phys 11:103045
Li J-L, Jia J-F, Liang X-J, Liu X, Wang J-Z, Xue Q-K, Li Z-Q, Tse JS, Zhang Z, Zhang SB (2002) Phys Rev Lett 88:066101
Fonin M, Dedkov YS, Rudiger U, Guntherodt G (2003) Surf Sci 529:L275
Lauritsen JV, Kibsgaard J, Helveg S, Topsoe H, Clausen BS, Laegsgaard E, Besenbacher F (2007) Nat Nanotechnol 2:53
Geim AK (2009) Science 324:1530
Wintterlin J, Bocquet ML (2009) Surf Sci 603:1841
Eom D, Prezzi D, Rim KT, Zhou H, Lefenfeld M, Xiao S, Nuckolls C, Hybertsen MS, Heinz TF, Flynn GW (2009) Nano Lett 9:2844
Gamo Y, Nagashima A, Wakabayashi M, Terai M, Oshima C (1997) Surf Sci 374:61
Weser M, Rehder Y, Horn K, Sicot M, Fonin M, Preobrajenski AB, Voloshina EN, Goering E, Dedkov YS (2010) Appl Phys Lett 96:012504
Wu M-C, Xu Q, Goodman DW (1994) J Phys Chem 98:5104
Marchini S, Gunther S, Wintterlin J (2007) Phys Rev B 76:075429
Pan Y, Shi DX, Gao HJ (2007) Chin Phys 16:3151
Martoccia D, Willmott PR, Brugger T, Bjorck M, Gunther S, Schleputz CM, Cervellino A, Pauli SA, Patterson BD, Marchini S, Wintterlin J, Moritz W, Greber T (2008) Phys Rev Lett 101:126102
Moritz W, Wang B, Bocquet ML, Brugger T, Greber T, Wintterlin J, Gunther S (2010) Phys Rev Lett 104:136102
Zhang H, Fu Q, Cui Y, Tan DL, Bao XH (2009) J Phys Chem C 113:8296
Zhou Z, Gao F, Goodman DW (2010) Surf Sci 604:L31
Sicot M, Bouvron S, Zander O, Rudiger U, Dedkov YS, Fonin M (2010) Appl Phys Lett 96:093115
Coraux J, N’Diaye AT, Busse C, Michely T (2008) Nano Lett 8:565
Coraux J, N’Diaye AT, Engler M, Busse C, Wall D, Buckanie N, Heringdorf F, van Gastei R, Poelsema B, Michely T (2009) New J Phys 11:023006
N’Diaye AT, Coraux J, Plasa TN, Busse C, Michely T (2008) New J Phys 10:043033
Gao J-H, Ishida N, Scott I, Fujita D (2012) Carbon 50:1674
Kwon S-Y, Ciobanu CV, Petrova V, Shenoy VB, Bareño J, Gambin V, Petrov I, Kodambaka S (2009) Nano Lett 9:3985
Chen X, Liu S, Liu L, Liu X, Liu X, Wang L (2012) Appl Phys Lett 100:163106
Kim W, Yoo K, Seo EK, Kim SJ, Hwang C (2011) J Korean Phys Soc 59:71
Land TA, Michely T, Behm RJ, Hemminger JC, Comsa G (1992) Surf Sci 264:261
Sutter PW, Flege JI, Sutter EA (2008) Nat Mater 7:406
Borca B, Calleja F, Hinarejos JJ, de Parga ALV, Miranda R (2009) J Phys-Condens Matter 21:134002
Vázquez de Parga AL, Calleja F, Borca B, Passeggi MCG, Hinarejos JJ, Guinea F, Miranda R (2008) Phys Rev Lett 100:056807
Katsiev K, Losovyj Y, Zhou Z, Vescovo E, Liu L, Dowben PA, Goodman DW (2012) Phys Rev B 85:195405
Xu Y, Semidey-Flecha L, Liu L, Zhou Z, Goodman DW (2011) Faraday Discuss 152:267
Jiang DE, Du MH, Dai S (2009) J Chem Phys 130:074705
Brugger T, Gunther S, Wang B, Dil JH, Bocquet ML, Osterwalder J, Wintterlin J, Greber T (2009) Phys Rev B 79:045407
Wang B, Bocquet ML, Marchini S, Gunther S, Wintterlin J (2008) Phys Chem Chem Phys 10:3530
Preobrajenski AB, Ng ML, Vinogradov AS, Martensson N (2008) Phys Rev B 78:073401
Zhou Z, Habenicht BF, Guo Q, Yan Z, Xu Y, Liu L, Goodman DW (2013) Surf Sci 611:67
Huang L, Pan Y, Pan L, Gao M, Xu W, Que Y, Zhou H, Wang Y, Du S, Gao HJ (2011) Appl Phys Lett 99:163107
Engstfeld AK, Beckord S, Lorenz CD, Behm RJ (2012) ChemPhysChem 13:3313
Addou R, Dahal A, Batzill M (2012) Surf Sci 606:1108
Subrahmanyam KS, Manna AK, Pati SK, Rao CNR (2010) Chem Phys Lett 497:70
Zhou M, Zhang A, Dai Z, Feng YP, Zhang C (2010) J Phys Chem C 114:16541
Lim D-H, Negreira AS, Wilcox J (2011) J Phys Chem C 115:8961
Liu X, Wang CZ, Hupalo M, Lu WC, Tringides MC, Yao YX, Ho KM (2012) Phys Chem Chem Phys 14:9157
Pan Y, Gao M, Huang L, Liu F, Gao HJ (2009) Appl Phys Lett 95:093106
Donner K, Jakob P (2009) J Chem Phys 131:164701
Sutter E, Albrecht P, Wang B, Bocquet ML, Wu LJ, Zhu YM, Sutter P (2011) Surf Sci 605:1676
Gyamfi M, Eelbo T, Waśniowska M, Wiesendanger R (2011) Phys Rev B 84:113403
Wang B, Yoon B, König M, Fukamori Y, Esch F, Heiz U, Landman U (2012) Nano Lett 12:5907
Starr DE, Pazhetnov EM, Stadnichenko AI, Boronin AI, Shaikhutdinov SK (2006) Surf Sci 600:2688
Feibelman PJ (2009) Phys Rev B 80:085412
Wang B, Bocquet M-L (2011) J Phys Chem Lett 2:2341
Sholl DS, Skodje RT (1995) Phys Rev Lett 75:3158
Barth JV (2000) Surf Sci Rep 40:75
Semidey-Flecha L, Teng D, Habenicht BF, Sholl DS, Xu Y (2013) J Chem Phys 138:184710
Kresse G, Furthmuller J (1996) Comp Mater Sci 6:15
Kresse G, Furthmuller J (1996) Phys Rev B 54:11169
Kresse G, Hafner J (1994) Phys Rev B 49:14251
Perdew JJ, Burke K, Ernzerhof M (1996) Phys Rev Lett 77:3865
Blochl PE (1994) Phys Rev B 50:17953
Methfessel M, Paxton AT (1989) Phys Rev B 40:3616
Chan KT, Neaton JB, Cohen ML (2008) Phys Rev B 77:235430
Hu LB, Hu XR, Wu XB, Du CL, Dai YC, Deng JB (2010) Physica B 405:3337
Neugebauer J, Scheffler M (1992) Phys Rev B 46:16067
Henkelman G, Uberuaga BP, Jónsson H (2000) J Chem Phys 113:9901
Wang B, Gunther S, Wintterlin J, Bocquet ML (2010) New J Phys 12:043041
Yazyev OV, Pasquarello A (2010) Phys Rev B 82:045407
Okazaki-Maeda K, Morikawa Y, Tanaka S, Kohyama M (2010) Surf Sci 604:144
Varns R, Strange P (2008) J Phys-Condens Mat 20:225005
Valencia H, Gil A, Frapper G (2010) J Phys Chem C 114:14141
Teng D, Sholl DS (in press) Surf Sci
Nilekar AU, Greeley J, Mavrikakis M (2006) Angew Chem Int Ed 45:7046
Habenicht BF, Xu Y, Liu L (2013) In: Chen Z, Jiang D (eds) Graphene chemistry: theoretical perspectives, Wiley
Acknowledgments
We congratulate Prof. Jens K. Nørskov on his 60th birthday, and thank him for the tremendous leadership and inspiration that he has provided to the field of computational catalysis and surface science. This study was supported as part of the Center for Atomic Level Catalyst Design, an Energy Frontier Research Center funded by the U.S. Department of Energy, Office of Science, and Office of Basic Energy Sciences under Award Number DE-SC0001058, and used resources of the National Energy Research Scientific Computing Center, which is supported by DOE Office of Science under Contract DE-AC02-05CH11231. Additional computing resources of Oak Ridge National Laboratory and Georgia Institute of Technology were used.
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Bradley F. Habenicht, Dieh Teng, Lymarie Semidey-Flecha contributed equally to this work.
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Habenicht, B.F., Teng, D., Semidey-Flecha, L. et al. Adsorption and Diffusion of 4d and 5d Transition Metal Adatoms on Graphene/Ru(0001) and the Implications for Cluster Nucleation. Top Catal 57, 69–79 (2014). https://doi.org/10.1007/s11244-013-0163-6
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DOI: https://doi.org/10.1007/s11244-013-0163-6