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Mapping of adult plant recessive resistance to anthracnose in Indian common bean landrace Baspa/KRC 8

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Abstract

Background

The common bean (Phaseolus vulgaris) has become the food of choice owing to its wealthy nutritional profile, leading to a considerable increase in its cultivation worldwide. However, anthracnose has been a major impediment to production and productivity, as elite bean cultivars are vulnerable to this disease. To overcome barriers in crop production, scientists worldwide are working towards enhancing the genetic diversity of crops. One way to achieve this is by introducing novel genes from related crops, including landraces like KRC 8. This particular landrace, found in the North Western Himalayan region, has shown adult plant resistance against anthracnose and also possesses a recessive resistance gene.

Methods and results

In this study, a population of 179 F2:9 RIL individuals (Jawala × KRC 8) was evaluated at both phenotypic and genotypic levels using over 830 diverse molecular markers to map the resistance gene present in KRC 8. We have successfully mapped a resistance gene to chromosome Pv01 using four SSR markers, namely IAC 238, IAC 235, IAC 259, and BM 146. The marker IAC 238 is closely linked to the gene with a distance of 0.29 cM, while the other markers flank the recessive resistance gene at 10.87 cM (IAC 259), 17.80 cM (BM 146), and 25.22 cM (IAC 235). Previously, a single recessive anthracnose resistance gene (co-8) has been reported in the common bean accession AB 136. However, when we performed PCR amplification with our tightly linked marker IAC 238, we got different amplicons in AB 136 and KRC 8. Interestingly, the susceptible cultivar Jawala produced the same amplicon as AB 136. This observation indicated that the recessive gene present in KRC 8 is different from co-8. As the gene is located far away from the Co-1 locus, we suggest naming the recessive gene co-Indb/co-19. Fine mapping of co-Indb in KRC 8 may provide new insights into the cloning and characterization of this recessive gene so that it can be incorporated into future bean improvement programs. Further, the tightly linked marker IAC 238 can be utilized in marker assisted introgression in future bean breeding programs.

Conclusion

The novel co-Indb gene present in Himalayan landrace KRC 8, showing adult plant resistance against common bean anthracnose, is independent from all the resistance genes previously located on chromosome Pv01.

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Data availability

The data sets generated in the current study are available in the supplementary files and additional information if needed can be obtained from corresponding author on reasonable request.

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Funding

The corresponding author thank Department of Biotechnology, Government of India (Grant No: BT/PR38582/AGRIII/103/1245/2020) for financial assistance.

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Authors and Affiliations

  1. Molecular Plant Pathology Laboratory, Department of Plant Pathology, CSK HP Agricultural University, Palampur, 176 062, Himachal Pradesh, India

    Anila Badiyal, Shiwali Dhiman, Amar Singh, Shabnam Katoch & Prem N. Sharma

  2. Department of Agricultural Biotechnology, CSK HP Agricultural University, Palampur, 176 062, Himachal Pradesh, India

    Rajeev Rathour

  3. Faculty of Agriculture, DAV University, Jalandhar, 144001, Punjab, India

    Anju Pathania

  4. Plant Virology and Molecular Plant Pathology Laboratory, Division of Plant Pathology, SKUAST-K Srinagar, Srinagar, 190025, J&K, India

    Bilal A. Padder

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  1. Anila Badiyal
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Contributions

All the authors have contributed in the study. The study was conceptualized by PNS, BAP and RR. AB, SD and SK performed the phenotyping and genotyping. AB, AS and AP developed RIL population. AB, BAP wrote the first draft. BAP and PNS edited the manuscript. RR helped in linkage map construction.

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Correspondence to Bilal A. Padder or Prem N. Sharma.

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Badiyal, A., Dhiman, S., Singh, A. et al. Mapping of adult plant recessive resistance to anthracnose in Indian common bean landrace Baspa/KRC 8. Mol Biol Rep 51, 254 (2024). https://doi.org/10.1007/s11033-023-09160-3

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