Abstract
Myocardin is a potent transcriptional coactivator protein, which functions as the master regulator of vascular smooth muscle cell differentiation. The cofactor activity of myocardin is mediated by its physical interaction with serum response factor, a ubiquitously expressed transactivator that binds to CArG boxes in genes encoding smooth muscle-restricted proteins. Purine-rich element binding protein B (Purβ) represses the transcription of the smooth muscle α-actin gene (Acta2) in fibroblasts and smooth muscle cells by interacting with single-stranded DNA sequences flanking two 5′ CArG boxes in the Acta2 promoter. In this study, the ability of Purβ to modulate the cofactor activity of myocardin was investigated using a combination of cellular and biochemical approaches. Results of smooth muscle gene promoter-reporter assays indicated that Purβ specifically inhibits the coactivator function of myocardin in a manner requiring the presence of all three single-stranded DNA binding domains in the Purβ homodimer. DNA binding analyses demonstrated that Purβ interacts with CArG-containing DNA elements with a much lower affinity compared to other purine-rich target sequences present in the Acta2 promoter. Co-immunoprecipitation and DNA pull-down assays revealed that Purβ associates with myocardin and serum response factor when free or bound to duplex DNA containing one or more CArG boxes. Functional analysis of engineered Purβ point mutants identified several amino acid residues essential for suppression of myocardin activity. Collectively, these findings suggest an inhibitory mechanism involving direct protein–protein interaction between the homodimeric Purβ repressor and the myocardin-serum response factor-CArG complex.
Similar content being viewed by others
Data availability
The data sets used and/or analyzed that support the findings of this study are available from the corresponding author upon reasonable request.
Abbreviations
- Purα:
-
Purine-rich element binding protein A
- Purβ:
-
Purine-rich element binding protein B
- SRF:
-
Serum response factor
- Myocd:
-
Myocardin
- ssDNA:
-
Single-stranded DNA
- MCAT:
-
Muscle-CAT
- CArG:
-
CC(A + T-rich)6GG
- MEF:
-
Mouse embryo fibroblast
- VSMC:
-
Vascular smooth muscle cell
- FBS:
-
Fetal bovine serum
- WT:
-
Wild type
- BSA:
-
Bovine serum albumin
- SDS:
-
Sodium dodecyl sulfate
- PAGE:
-
Polyacrylamide gel electrophoresis
- DTT:
-
Dithiothreitol
- PMSF:
-
Phenylmethylsulfonyl fluoride
- ELISA:
-
Enzyme-linked immunosorbent assay
- HRP:
-
Horseradish peroxidase
- TGF-β1:
-
Transforming growth factor β1
- bp:
-
Base pair
- nt:
-
Nucleotide
- h:
-
Hour
- min:
-
Minute
- sec:
-
Second
References
Benjamin EJ, Virani SS, Callaway CW, Chamberlain AM, Chang AR, Cheng S, Chiuve SE, Cushman M, Delling FN, Deo R, de Ferranti SD, Ferguson JF, Fornage M, Gillespie C, Isasi CR, Jimenez MC, Jordan LC, Judd SE, Lackland D, Lichtman JH, Lisabeth L, Liu S, Longenecker CT, Lutsey PL, Mackey JS, Matchar DB, Matsushita K, Mussolino ME, Nasir K, O’Flaherty M, Palaniappan LP, Pandey A, Pandey DK, Reeves MJ, Ritchey MD, Rodriguez CJ, Roth GA, Rosamond WD, Sampson UKA, Satou GM, Shah SH, Spartano NL, Tirschwell DL, Tsao CW, Voeks JH, Willey JZ, Wilkins JT, Wu JH, Alger HM, Wong SS, Muntner P (2018) Heart disease and stroke statistics-2018 update: a report from the American Heart Association. Circulation 137:e67–e492. https://doi.org/10.1161/cir.0000000000000558
Ross R (1999) Atherosclerosis–an inflammatory disease. N Engl J Med 340:115–126. https://doi.org/10.1056/nejm199901143400207
Tabas I (2017) 2016 Russell Ross Memorial Lecture in Vascular Biology: molecular-cellular mechanisms in the progression of atherosclerosis. Arterioscler Thromb Vasc Biol 37:183–189. https://doi.org/10.1161/atvbaha.116.308036
Lusis AJ (2000) Atherosclerosis. Nature 407:233–241. https://doi.org/10.1038/35025203
Bennett MR, Sinha S, Owens GK (2016) Vascular smooth muscle cells in atherosclerosis. Circ Res 118:692–702. https://doi.org/10.1161/circresaha.115.306361
Allahverdian S, Chaabane C, Boukais K, Francis GA, Bochaton-Piallat ML (2018) Smooth muscle cell fate and plasticity in atherosclerosis. Cardiovasc Res 114:540–550. https://doi.org/10.1093/cvr/cvy022
Owens GK, Kumar MS, Wamhoff BR (2004) Molecular regulation of vascular smooth muscle cell differentiation in development and disease. Physiol Rev 84:767–801. https://doi.org/10.1152/physrev.00041.2003
Owens GK (1995) Regulation of differentiation of vascular smooth muscle cells. Physiol Rev 75:487–517. https://doi.org/10.1152/physrev.1995.75.3.487
Chamley-Campbell J, Campbell GR, Ross R (1979) The smooth muscle cell in culture. Physiol Rev 59:1–61. https://doi.org/10.1152/physrev.1979.59.1.1
Shankman LS, Gomez D, Cherepanova OA, Salmon M, Alencar GF, Haskins RM, Swiatlowska P, Newman AA, Greene ES, Straub AC, Isakson B, Randolph GJ, Owens GK (2015) KLF4-dependent phenotypic modulation of smooth muscle cells has a key role in atherosclerotic plaque pathogenesis. Nat Med 21:628–637. https://doi.org/10.1038/nm.3866
Clarke MC, Figg N, Maguire JJ, Davenport AP, Goddard M, Littlewood TD, Bennett MR (2006) Apoptosis of vascular smooth muscle cells induces features of plaque vulnerability in atherosclerosis. Nat Med 12:1075–1080. https://doi.org/10.1038/nm1459
Clarke MC, Littlewood TD, Figg N, Maguire JJ, Davenport AP, Goddard M, Bennett MR (2008) Chronic apoptosis of vascular smooth muscle cells accelerates atherosclerosis and promotes calcification and medial degeneration. Circ Res 102:1529–1538. https://doi.org/10.1161/circresaha.108.175976
Rong JX, Shapiro M, Trogan E, Fisher EA (2003) Transdifferentiation of mouse aortic smooth muscle cells to a macrophage-like state after cholesterol loading. Proc Natl Acad Sci USA 100:13531–13536. https://doi.org/10.1073/pnas.1735526100
Schrijvers DM, De Meyer GR, Kockx MM, Herman AG, Martinet W (2005) Phagocytosis of apoptotic cells by macrophages is impaired in atherosclerosis. Arterioscler Thromb Vasc Biol 25:1256–1261. https://doi.org/10.1161/01.ATV.0000166517.18801.a7
Wang Z, Wang DZ, Pipes GC, Olson EN (2003) Myocardin is a master regulator of smooth muscle gene expression. Proc Natl Acad Sci USA 100:7129–7134. https://doi.org/10.1073/pnas.1232341100
Miano JM (2015) Myocardin in biology and disease. J Biomed Res 29:3–19. https://doi.org/10.7555/jbr.29.20140151
Chen J, Kitchen CM, Streb JW, Miano JM (2002) Myocardin: a component of a molecular switch for smooth muscle differentiation. J Mol Cell Cardiol 34:1345–1356. https://doi.org/10.1006/jmcc.2002.2086
Long X, Bell RD, Gerthoffer WT, Zlokovic BV, Miano JM (2008) Myocardin is sufficient for a smooth muscle-like contractile phenotype. Arterioscler Thromb Vasc Biol 28:1505–1510. https://doi.org/10.1161/atvbaha.108.166066
Carlini LE, Getz MJ, Strauch AR, Kelm RJ Jr (2002) Cryptic MCAT enhancer regulation in fibroblasts and smooth muscle cells. Suppression of TEF-1 mediated activation by the single-stranded DNA-binding proteins, Pur alpha, Pur beta, and MSY1. J Biol Chem 277:8682–8692. https://doi.org/10.1074/jbc.M109754200
Knapp AM, Ramsey JE, Wang SX, Godburn KE, Strauch AR, Kelm RJ Jr (2006) Nucleoprotein interactions governing cell type-dependent repression of the mouse smooth muscle alpha-actin promoter by single-stranded DNA-binding proteins Pur alpha and Pur beta. J Biol Chem 281:7907–7918. https://doi.org/10.1074/jbc.M509682200
Imamura M, Long X, Nanda V, Miano JM (2010) Expression and functional activity of four myocardin isoforms. Gene 464:1–10. https://doi.org/10.1016/j.gene.2010.03.012
Kelm RJ Jr, Wang SX, Polikandriotis JA, Strauch AR (2003) Structure/function analysis of mouse Purbeta, a single-stranded DNA-binding repressor of vascular smooth muscle alpha-actin gene transcription. J Biol Chem 278:38749–38757. https://doi.org/10.1074/jbc.M306163200
Rumora AE, Wang SX, Ferris LA, Everse SJ, Kelm RJ Jr (2013) Structural basis of multisite single-stranded DNA recognition and ACTA2 repression by purine-rich element binding protein B (Purbeta). Biochemistry 52:4439–4450. https://doi.org/10.1021/bi400283r
Rumora AE, Ferris LA, Wheeler TR, Kelm RJ Jr (2016) Electrostatic and hydrophobic interactions mediate single-stranded DNA recognition and Acta2 repression by purine-rich element-binding protein B. Biochemistry 55:2794–2805. https://doi.org/10.1021/acs.biochem.6b00006
Ferris LA, Kelm RJ Jr (2019) Structural and functional analysis of single-nucleotide polymorphic variants of purine-rich element-binding protein B. J Cell Biochem 120:5835–5851. https://doi.org/10.1002/jcb.27869
Schrodinger LLC (2015) The PyMOL molecular graphics system. Version 1.8
Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, Ferrin TE (2004) UCSF Chimera–a visualization system for exploratory research and analysis. J Comput Chem 25:1605–1612. https://doi.org/10.1002/jcc.20084
Ramsey JE, Daugherty MA, Kelm RJ Jr (2007) Hydrodynamic studies on the quaternary structure of recombinant mouse Purbeta. J Biol Chem 282:1552–1560. https://doi.org/10.1074/jbc.M609356200
Stoflet ES, Schmidt LJ, Elder PK, Korf GM, Foster DN, Strauch AR, Getz MJ (1992) Activation of a muscle-specific actin gene promoter in serum-stimulated fibroblasts. Mol Biol Cell 3:1073–1083. https://doi.org/10.1091/mbc.3.10.1073
Wang SX, Elder PK, Zheng Y, Strauch AR, Kelm RJ Jr (2005) Cell cycle-mediated regulation of smooth muscle alpha-actin gene transcription in fibroblasts and vascular smooth muscle cells involves multiple adenovirus E1A-interacting cofactors. J Biol Chem 280:6204–6214. https://doi.org/10.1074/jbc.M409506200
Foster DN, Min B, Foster LK, Stoflet ES, Sun S, Getz MJ, Strauch AR (1992) Positive and negative cis-acting regulatory elements mediate expression of the mouse vascular smooth muscle alpha-actin gene. J Biol Chem 267:11995–12003
Wang J, Niu W, Nikiforov Y, Naito S, Chernausek S, Witte D, LeRoith D, Strauch A, Fagin JA (1997) Targeted overexpression of IGF-I evokes distinct patterns of organ remodeling in smooth muscle cell tissue beds of transgenic mice. J Clin Invest 100:1425–1439. https://doi.org/10.1172/jci119663
Wang D, Chang PS, Wang Z, Sutherland L, Richardson JA, Small E, Krieg PA, Olson EN (2001) Activation of cardiac gene expression by myocardin, a transcriptional cofactor for serum response factor. Cell 105:851–862
Hendrix JA, Wamhoff BR, McDonald OG, Sinha S, Yoshida T, Owens GK (2005) 5’ CArG degeneracy in smooth muscle alpha-actin is required for injury-induced gene suppression in vivo. J Clin Invest 115:418–427. https://doi.org/10.1172/jci22648
Hariharan S, Kelm RJ Jr, Strauch AR (2014) The Puralpha/Purbeta single-strand DNA-binding proteins attenuate smooth-muscle actin gene transactivation in myofibroblasts. J Cell Physiol 229:1256–1271. https://doi.org/10.1002/jcp.24564
McDonald OG, Wamhoff BR, Hoofnagle MH, Owens GK (2006) Control of SRF binding to CArG box chromatin regulates smooth muscle gene expression in vivo. J Clin Invest 116:36–48. https://doi.org/10.1172/jci26505
Kelm RJ Jr, Elder PK, Strauch AR, Getz MJ (1997) Sequence of cDNAs encoding components of vascular actin single-stranded DNA-binding factor 2 establish identity to Puralpha and Purbeta. J Biol Chem 272:26727–26733. https://doi.org/10.1074/jbc.272.42.26727
Gupta M, Sueblinvong V, Raman J, Jeevanandam V, Gupta MP (2003) Single-stranded DNA-binding proteins PURalpha and PURbeta bind to a purine-rich negative regulatory element of the alpha-myosin heavy chain gene and control transcriptional and translational regulation of the gene expression. Implications in the repression of alpha-myosin heavy chain during heart failure. J Biol Chem 278:44935–44948. https://doi.org/10.1074/jbc.M307696200
Subramanian SV, Kelm RJ, Polikandriotis JA, Orosz CG, Strauch AR (2002) Reprogramming of vascular smooth muscle alpha-actin gene expression as an early indicator of dysfunctional remodeling following heart transplant. Cardiovasc Res 54:539–548. https://doi.org/10.1016/s0008-6363(02)00270-5
van Rooij E, Quiat D, Johnson BA, Sutherland LB, Qi X, Richardson JA, Kelm RJ Jr, Olson EN (2009) A family of microRNAs encoded by myosin genes governs myosin expression and muscle performance. Dev Cell 17:662–673. https://doi.org/10.1016/j.devcel.2009.10.013
Gurha P, Abreu-Goodger C, Wang T, Ramirez MO, Drumond AL, van Dongen S, Chen Y, Bartonicek N, Enright AJ, Lee B, Kelm RJ Jr, Reddy AK, Taffet GE, Bradley A, Wehrens XH, Entman ML, Rodriguez A (2012) Targeted deletion of microRNA-22 promotes stress-induced cardiac dilation and contractile dysfunction. Circulation 125:2751–2761. https://doi.org/10.1161/circulationaha.111.044354
Yousefzadeh N, Jeddi S, Ghiasi R, Alipour MR (2017) Effect of fetal hypothyroidism on MyomiR network and its target gene expression profiles in heart of offspring rats. Mol Cell Biochem 436:179–187. https://doi.org/10.1007/s11010-017-3089-7
Subramanian SV, Polikandriotis JA, Kelm RJ Jr, David JJ, Orosz CG, Strauch AR (2004) Induction of vascular smooth muscle alpha-actin gene transcription in transforming growth factor beta1-activated myofibroblasts mediated by dynamic interplay between the Pur repressor proteins and Sp1/Smad coactivators. Mol Biol Cell 15:4532–4543. https://doi.org/10.1091/mbc.e04-04-0348
Gupta M, Sueblinvong V, Gupta MP (2007) The single-strand DNA/RNA-binding protein, Purbeta, regulates serum response factor (SRF)-mediated cardiac muscle gene expression. Can J Physiol Pharmacol 85:349–359. https://doi.org/10.1139/y07-009
Cao D, Wang Z, Zhang CL, Oh J, Xing W, Li S, Richardson JA, Wang DZ, Olson EN (2005) Modulation of smooth muscle gene expression by association of histone acetyltransferases and deacetylases with myocardin. Mol Cell Biol 25:364–376. https://doi.org/10.1128/mcb.25.1.364-376.2005
Liu ZP, Wang Z, Yanagisawa H, Olson EN (2005) Phenotypic modulation of smooth muscle cells through interaction of Foxo4 and myocardin. Dev Cell 9:261–270. https://doi.org/10.1016/j.devcel.2005.05.017
Zhou J, Hu G, Wang X (2010) Repression of smooth muscle differentiation by a novel high mobility group box-containing protein, HMG2L1. J Biol Chem 285:23177–23185. https://doi.org/10.1074/jbc.M110.109868
Tanaka T, Sato H, Doi H, Yoshida CA, Shimizu T, Matsui H, Yamazaki M, Akiyama H, Kawai-Kowase K, Iso T, Komori T, Arai M, Kurabayashi M (2008) Runx2 represses myocardin-mediated differentiation and facilitates osteogenic conversion of vascular smooth muscle cells. Mol Cell Biol 28:1147–1160. https://doi.org/10.1128/mcb.01771-07
Xie C, Guo Y, Zhu T, Zhang J, Ma PX, Chen YE (2012) Yap1 protein regulates vascular smooth muscle cell phenotypic switch by interaction with myocardin. J Biol Chem 287:14598–14605. https://doi.org/10.1074/jbc.M111.329268
Morita T, Hayashi K (2014) Arp5 is a key regulator of myocardin in smooth muscle cells. J Cell Biol 204:683–696. https://doi.org/10.1083/jcb.201307158
Liu F, Wang X, Hu G, Wang Y, Zhou J (2014) The transcription factor TEAD1 represses smooth muscle-specific gene expression by abolishing myocardin function. J Biol Chem 289:3308–3316. https://doi.org/10.1074/jbc.M113.515817
Zhang SM, Gao L, Zhang XF, Zhang R, Zhu LH, Wang PX, Tian S, Yang D, Chen K, Huang L, Zhang XD, Li H (2014) Interferon regulatory factor 8 modulates phenotypic switching of smooth muscle cells by regulating the activity of myocardin. Mol Cell Biol 34:400–414. https://doi.org/10.1128/mcb.01070-13
Zhou YX, Shi Z, Singh P, Yin H, Yu YN, Li L, Walsh MP, Gui Y, Zheng XL (2016) Potential role of glycogen synthase kinase-3beta in regulation of myocardin activity in human vascular smooth muscle cells. J Cell Physiol 231:393–402. https://doi.org/10.1002/jcp.25084
Regan CP, Adam PJ, Madsen CS, Owens GK (2000) Molecular mechanisms of decreased smooth muscle differentiation marker expression after vascular injury. J Clin Investig 106:1139–1147. https://doi.org/10.1172/JCI10522
Cogan JG, Subramanian SV, Polikandriotis JA, Kelm RJ Jr, Strauch AR (2002) Vascular smooth muscle alpha-actin gene transcription during myofibroblast differentiation requires Sp1/3 protein binding proximal to the MCAT enhancer. J Biol Chem 277:36433–36442. https://doi.org/10.1074/jbc.M203232200
Wamhoff BR, Hoofnagle MH, Burns A, Sinha S, McDonald OG, Owens GK (2004) A G/C element mediates repression of the SM22α promoter within phenotypically modulated smooth muscle cells in experimental atherosclerosis. Circ Res 95:981–988. https://doi.org/10.1161/01.RES.0000147961.09840.fb
Knapp AM, Ramsey JE, Wang SX, Strauch AR, Kelm RJ Jr (2007) Structure-function analysis of mouse Pur beta II. Conformation altering mutations disrupt single-stranded DNA and protein interactions crucial to smooth muscle alpha-actin gene repression. J Biol Chem 282:35899–35909. https://doi.org/10.1074/jbc.M706617200
Funding
This study was supported by a Grant from the American Heart Association Founders Affiliate 16GRNT31160006. LAF was supported by an institutional training Grant from the National Heart, Lung, and Blood Institute T32 HL007594.
Author information
Authors and Affiliations
Contributions
LAF and RJK conceived and designed the study. LAF, ATF, SXW, and RJK performed experiments and/or analyzed the resulting data. LAF and ATF developed and generated illustrations of protein structure and protein-DNA interaction. LAF, ATF, and RJK wrote and/or edited the manuscript.
Corresponding author
Ethics declarations
Conflict of interest
The authors declare that there are no conflicts of interest.
Ethical approval
All experiments and procedures involving the use of mice were carried out in accordance with the National Institutes of Health Guide for the Care and Use of Laboratory Animals and with the approval of the University of Vermont Institutional Animal Care and Use Committee.
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary Information
Below is the link to the electronic supplementary material.
Rights and permissions
About this article
Cite this article
Ferris, L.A., Foote, A.T., Wang, SX. et al. Purine-rich element binding protein B attenuates the coactivator function of myocardin by a novel molecular mechanism of smooth muscle gene repression. Mol Cell Biochem 476, 2899–2916 (2021). https://doi.org/10.1007/s11010-021-04117-1
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11010-021-04117-1