Abstract
The cAMP-dependent protein kinase (PKA) is the best understood member of the superfamily of serine–threonine protein kinases and is involved in controlling a variety of cellular processes. Measurements of PKA activity traditionally relied on the use of [32P]-labeled ATP as the phosphate donor and a protein or peptide substrate as the phosphoaceptor. Recently non-isotopic assays for the PKA have been developed and this paper presents an improvement of a fluorometric assay for measuring the activity of PKA. Three peptides were synthesized with the following sequences: LRRASLG (Kemptide), LRRASLGK (Kemptide-Lys8) and LRRASLGGGLRRASLG (Bis-Kemptide), these have in common the substrate sequence recognized by the PKA (RRXS/TΨ), where X is any amino acid and Ψ is a hydrophobic amino acid. Optimal conditions were established for the non-radioactive assay to detect the PKA activity by phosphorylation of these three peptides that are covalently linked to fluorescamine at their N-terminus. The phosphorylated and non-phosphorylated peptides were easily separated by electrophoresis, identified and quantified with optical densitometry and ultraviolet light. The fluorescamine-labeled Kemptide-Lys8 substrate (Fluram-Kemptide-Lys8) was used to calculate the Km and Vmax of the catalytic subunit of PKA from pig heart and showed a detection limit of 260 pmol, a linear range between 700 and 1150 pmol with a linear regression R 2 = 0.956.
Abbreviations
- ATP:
-
Adenosine triphosphate
- AMP:
-
Adenosine monophosphate
- cAMP:
-
Cyclic adenosine monophosphate
- PKA:
-
Protein kinase A
- PKAc:
-
Catalytic subunit of protein kinase A
- UV:
-
Ultraviolet
- HPLC:
-
High-performance liquid chromatography
- Km:
-
Michaelis–Menten constant
- Fluram:
-
Fluorescamine
- Lys:
-
Lysine
- Fluram-Kemptide-Lys8:
-
Fluorescamine-labeled Kemptide-Lys8
References
Roskoski R Jr (1983) Assays of protein kinase. Method Enzymol 99:3–6
Favre B, Ojha M (1991) Purification and properties of a casein kinase II-like enzyme from Neurospora crassa. FEMS Microbiol Lett 78:21–24
Mall GW, Kaiser ET (1977) Ionic inhibition of catalytic phosphorylation of histone by bovine brain protein kinase. J Biol Chem 252:3007–3011
Wright DE, Noiman ES, Chock PB, Chau V (1981) Fluorometric assay for adenosine 3′,5′-cyclic monophosphate-dependent protein kinase and phosphoprotein phosphatase activities. Proc Natl Acad Sci USA 78(10):6048–6050
Marshak DR, Carroll D (1991) Synthetic peptide substrates for casein kinase II. Method Enzymol 200:134–156
Madden JA, Bird MI, Man Y, Raven T, Myles DD (1991) Two nonradioactive assays for phosphotyrosine phosphatases with activity toward the insulin receptor. Anal Biochem 199(2):210–215
Hjelmquist G, Andersson J, Edlund B, Engstrijm L (1974) Amino acid sequence of a [32P]phosphopeptide from pig liver pyruvate kinase phosphorylated by cyclic 3′,5′-AMP-stimulated protein kinase and γ-(32P)ATP. Biochem Biophys Res Commun 61(2):559–563
Kemp BE, Graves DJ, Benjamini E, Krebs EG (1977) Role of multiple basic residues in determining the substrate specificity of cyclic AMP-dependent protein kinase. J Biol Chem 252(14):4888–4894
Kemp BE, Pearson RB (1991) Design and use of peptide substrates for protein kinases. Method Enzymol 200:121–134
Kemp BE, Parker MW, Hu S, Tiganis T, House C (1994) Substrate and pseudosubstrate interactions with protein kinases: determinants of specificity. Trends Biochem Sci 19:440–443
Lutz MP, Pinon DI, Miller LJ (1994) A nonradioactive fluorescent gel-shift assay for the analysis of proteins phosphatase and kinases activities toward protein-specific peptides substrates. Anal Biochem 220:268–274
Boppana VK, Miller-Stein C, Politowski JF, Rhodes GR (1991) High-performance liquid chromatographic determination of peptides in biological fluids by automated pre-column fluorescence derivatization with fluorescamine. J Chromatogr A 548:319–327
Merrifield RB (1963) Solid phase peptide synthesis. I. The synthesis of tetrapeptide. J Am Chem Soc 85(14):2149–2154
Bramson N, Thomas N, Matsueda R, Nelson N, Taylor SS, Kaiser ET (1982) Modification of the catalytic subunit of bovine heart cAMP-dependent protein kinase with affinity labels related to peptide substrates. J Biol Chem 257:10575–10581
Nelson NC, Taylor SS (1981) Differential labeling and identification of the cysteine-containing tryptic peptides of catalytic subunit from porcine heart cAMP-dependent protein kinase. J Biol Chem 256:3743–3750
Lineweaver H, Burk D (1934) The determination of enzyme dissociation constants. J Am Chem Soc 56:658–666
Chen RF (1974) Fluorescence properties of fluorescamine-protein conjugates. Anal Lett 7:65–77
Instruction Manual, Quick Start Bradford Protein Assay (1994) Bio-Rad. http://www.bio-rad.com/webroot/web/pdf/lsr/literature/4110065A.pdf. Accessed 16 May 2016
Weigele M, De Bernardo SL, Tengi JP, Leimgruber W (1972) J Am Chem Soc 94:5927
Mitchell RD, Glass DB, Wong CW, Angelos KL, Walsh DA (1995) Heat-stable inhibitor protein derived peptide substrate analogs: phosphorylation by CAMP-dependent and cGMP-dependent protein kinases. Biochemistry 34(2):528–534
Viht K, Vaasa A, Raidaru G, Enkvist E, Uri A (2005) Fluorometric TLC assay for evaluation of protein kinase inhibitors. Anal Biochem 340:165–170
Moore MJ, Adams JA, Taylor SS (2003) Structural basis for peptide binding in protein kinase A. Role of glutamic acid 203 and tyrosine 204 in the peptide-positioning loop. J Biol Chem 278(12):10613–10618
De Bernardo S, Weigele M, Toome V, Manhart K, Leimgruber W, Böhlen P, Stein S, Udenfriend S (1974) Studies on the reaction of fluorescamine with primary amines. Arch Biochem Biophys 163:390–399
Nakai XT, Lai CY, Horecke BL (1974) Use of fluorescamine in the chromatographic analysis of peptides from proteins. Anal Biochem 58:563–570
Stein S, Bohlen P, Stone J, Dairman W, Udenfriend S (1973) Amino acid analysis with fluorescamine at the picomole level. Arch Biochem Biophys 185:202–212
Karege F, Schwald M, Lambercy C, Murama JJ, Cisse M, Malafosse A (2001) A non-radioactive assay for the cAMP-dependent protein kinase activity in rat brain homogenates and age-related changes in hippocampus and cortex. Brain Res 903:86–93
Kemp B, Benjamini E, Krebs EG (1976) Synthetic hexapeptide substrates and inhibitors of 3′:5′-cyclic AMP dependent protein kinase. Proc Natl Acad Sci USA 73(4):1038–1042
Acknowledgments
This research was supported by Grant No. 2013001659 from FONACIT, Venezuela. We want to thank Dr. Oscar Noya (Universidad Central de Venezuela) for synthesizing and donating the peptides that were used in this work.
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
The authors declare that they have no conflict of interests regarding the publication of this article.
Rights and permissions
About this article
Cite this article
Araujo, N.A., Guevara, A., Lorenzo, M.A. et al. Fluram-Kemptide-Lys8 Non-radioactive Assay for Protein Kinase A. Protein J 35, 247–255 (2016). https://doi.org/10.1007/s10930-016-9667-9
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10930-016-9667-9