Skip to main content
Log in

Four xanthenyl-derived compounds: a comparative investigation of their host behaviour in the presence potential saturated and unsaturated heterocyclic six-membered ring guest solvents

  • Original Article
  • Published:
Journal of Inclusion Phenomena and Macrocyclic Chemistry Aims and scope Submit manuscript

Abstract

Four xanthenyl-derived host compounds, namely trans-N,N′-bis(9-phenyl-9-xanthenyl)cyclohexane-1,4-diamine (1,4-DAX), trans-N,N′-bis(9-phenyl-9-thioxanthenyl)cyclohexane-1,4-diamine (1,4-DAT), N,N′-bis(9-cyclohexyl-9-xanthenyl)ethylenediamine (OED) and N,N′-bis(9-cyclohexyl-9-thioxanthenyl)ethylenediamine (SED) were assessed for their selectivity behaviour in the presence of both the saturated and unsaturated heterocyclic six-membered ring guest solvents morpholine (MOR), piperidine (PIP), dioxane (DIO) and pyridine (PYR). Related compounds OED and SED behaved similarly when each was recrystallized from mixtures of these guests, both selecting for MOR and discriminating against PYR, while, surprisingly, the performance of structurally-similar 1,4-DAX and 1,4-DAT in equivalent conditions, on the other hand, was entirely contrasting: only 1,4-DAX formed complexes from such guest mixtures and 1,4-DAT failed to do so in each instance. Furthermore, 1,4-DAX preferred PYR, an observation distinct from that of OED and SED. Single crystal diffraction (SCXRD) experiments were carried out on suitable crystals formed by 1,4-DAX with these guests, and it was revealed that the preference for PYR may be attributed to both host–guest π–π interactions and a shorter H-bond between molecules of the host and PYR compared with other complexes. SCXRD experiments were not possible for OED, SED and 1,4-DAT owing to either the inability of the host compound to complex with these guests or poor crystal quality of the resultant complexes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Scheme 1
Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  1. https://www.sciencedirect.com. Accessed 29 Oct 2019

  2. Kuhn, R., Erni, F., Bereuter, T., Haeusler, J.: Chiral recognition and enantiomeric resolution based on host-guest complexation with crown ethers in capillary zone electrophoresis. J. Anal. Chem. 64, 2815–2820 (1992)

    Article  CAS  Google Scholar 

  3. Caira, M.R., Bourne, S.A., Samsodien, H., Smith, V.: Inclusion complexes of 2-methoxyestradiol with dimethylated and permethylated β-cyclodextrins: models for cyclodextrin-steroid interaction. J. Beilstein J. Org. Chem. 11, 2616–2630 (2015)

    Article  CAS  Google Scholar 

  4. Saleh, N., Khaleel, A., Al-Dmour, H., Al-Hindawi, B., Yakushenko, E.: Host–guest complexes of cucurbit [7] uril with albendazole in solid state. J. Therm. Anal. Calorim. 111, 385–392 (2013)

    Article  CAS  Google Scholar 

  5. Gao, Z.-Z., Bai, D., Xiao, Z.-Y., Zhu, Q.-J., Xue, S.-F., Tao, Z., Xiao, X.: Host–guest interactions in tetramethyl-cucurbit [6] uril with anti-tuberculosis drug isoniazid. Inorg. Chem. Commun. 71, 68–72 (2016)

    Article  CAS  Google Scholar 

  6. Patel, L.D., Separation of isomers by enclathration, MSc dissertation: 2014, Cape Peninsula University of Technology

  7. Sholl, D.S., Lively, R.P.: Seven chemical separations to change the world. Nature 532, 435–437 (2016)

    Article  Google Scholar 

  8. Lusi, M., Barbour, L.J.: Solid–vapor sorption of xylenes: prioritized selectivity as a means of separating all three isomers using a single substrate. Angew. Chem. Int. Ed. 51, 3928–3931 (2012)

    Article  CAS  Google Scholar 

  9. Pyka, I., Ryvlin, D., Waldvogel, S.R.: Application of rigidity-controlled supramolecular affinity materials for the gravimetric detection of hazardous and illicit compounds. ChemPlusChem 81, 926–929 (2016)

    Article  CAS  Google Scholar 

  10. Dickert, F.L., Haunschild, A.: Sensor materials for solvent vapor detection—donor–acceptor and host–guest interactions. Adv. Mater. 5, 887–895 (1993)

    Article  CAS  Google Scholar 

  11. Hughes, E., Jordan, J., Gullion, T.: Structural characterization of the [Cs(p-tert-butylcalix[4]arene−H)(MeCN)] guest−host system by 13C–133Cs REDOR NMR. J. Phys. Chem. B 105, 5887–5891 (2001)

    Article  CAS  Google Scholar 

  12. Erdemir, S., Bahadir, M., Yilmaz, M.: Extraction of carcinogenic aromatic amines from aqueous solution using calix[n]arene derivatives as carrier. J. Hazard. Mater. 168, 1170–1176 (2009)

    Article  CAS  Google Scholar 

  13. Szente, L., Szejtli, J.: Cyclodextrins as food ingredients. Trends Food Sci. Technol. 15, 137–142 (2004)

    Article  CAS  Google Scholar 

  14. Sousa, L.R., Sogah, G., Hoffman, D.H., Cram, D.J.: Host–guest complexation. 12. Total optical resolution of amine and amino ester salts by chromatography. J. Am. Chem. Soc. 100, 4569–4576 (1978)

    Article  CAS  Google Scholar 

  15. Wang, W., Bray, C.L., Adams, D.J., Cooper, A.I.: Methane storage in dry water gas hydrates. J. Am. Chem. Soc. 130, 11608–11609 (2008)

    Article  CAS  Google Scholar 

  16. Kumar, R., Linga, P., Moudrakovski, I., Ripmeester, J.A., Englezos, P.: Structure and kinetics of gas hydrates from methane/ethane/propane mixtures relevant to the design of natural gas hydrate storage and transport facilities. AIChE J. 54, 2132–2144 (2008)

    Article  CAS  Google Scholar 

  17. Lee, H., Lee, J.-W., Park, J., Seo, Y.-T., Zeng, H., Moudrakovski, I.L., Ratcliffe, C.I., Ripmeester, J.A.: Tuning clathrate hydrates for hydrogen storage. Nature 434, 743–746 (2005)

    Article  CAS  Google Scholar 

  18. Arjmandi, M., Chapoy, A., Tohidi, B.: Equilibrium data of hydrogen, methane, nitrogen, carbon dioxide, and natural gas in semi-clathrate hydrates of tetrabutyl ammonium bromide. J. Chem. Eng. Data 52, 2153–2158 (2007)

    Article  CAS  Google Scholar 

  19. Bai, C.C., Tian, B.R., Zhao, T., Huang, Q., Wang, Z.Z.: Cyclodextrin-catalyzed organic synthesis: reactions, mechanisms, and applications. Molecules 22, 1475/1–1475/17 (2017)

    CAS  Google Scholar 

  20. Drabowicz, J., Mikołajczyk, M.: Asymmetric oxidation of sulfides to sulfoxides catalyzed by β-cyclodextrin. Phosphorus Sulfur Rel. Elem. 21, 245–248 (1984)

    Article  CAS  Google Scholar 

  21. Czarnik, A.W.: Cyclodextrin-mediated chiral sulfoxidations. J. Org. Chem. 49, 924–927 (1984)

    Article  CAS  Google Scholar 

  22. Shen, H.-M., Ji, H.-B.: Amino alcohol-modified β-cyclodextrin inducing biomimetic asymmetric oxidation of thioanisole in water. Carbohydr. Res. 354, 49–58 (2012)

    Article  CAS  Google Scholar 

  23. Park, K.K., Sim, W.-J., Park, J.W.: Asymmetric induction by β-cyclodextrins in NaBH4 reduction of ketones. J. Incl. Phenom. Macrocycl. Chem. 27, 41–48 (1997)

    Article  CAS  Google Scholar 

  24. Barton, B., Jooste, D.V., Hosten, E.C.: Synthesis and assessment of compounds trans-N,N'-bis(9-phenyl-9-xanthenyl)cyclohexane-1,4-diamine and trans-N,N'-bis(9-phenyl-9-thioxanthenyl)cyclohexane-1,4-diamine as hosts for potential xylene and ethylbenzene guests. J. Incl. Phenom. Macrocycl. Chem. 93, 333–346 (2019)

    Article  CAS  Google Scholar 

  25. Barton, B., Senekal, U., Hosten, E.C.: Compounds N,N′-bis(9-cyclohexyl-9-xanthenyl)ethylenediamine and its thio derivative, N,N′-bis(9-cyclohexyl-9-thioxanthenyl)ethylenediamine, as potential hosts in the presence of xylenes and ethylbenzene: conformational analyses and molecular modelling considerations. Tetrahedron 75, 3399–3412 (2019)

    Article  CAS  Google Scholar 

  26. Barton, B., de Jager, L., Senekal, S., Hosten, E.C.: Comparing the effect of selected substituent changes on host ability and selectivity in four xanthenyl-type host compounds in the presence of cyclohexanone and methylcyclohexanone isomers. J. Incl. Phenom. Macrocycl. Chem. 95, 259–271 (2019)

    Article  CAS  Google Scholar 

  27. Senekal, U., Barton, B., Hosten, E.C.: Inclusion ability and selectivity of ethylenediamine derivatives for pyridine in the presence of methylpyridine isomers. J. Incl. Phenom. Macrocycl. Chem. 96, 251–262 (2020)

    CAS  Google Scholar 

  28. Bruker, A.X.S.: APEX2, SADABS and SAINT. Bruker, A.X.S., Madison, WI (2010)

    Google Scholar 

  29. Sheldrick, G.M.: SHELXT-integrated space-group and crystal structure determination. Acta Crystallogr. A 71, 3 (2015)

    Article  CAS  Google Scholar 

  30. Sheldrick, G.M.: Crystal structure refinement with SHELXL. Acta Crystallogr. C 71, 3 (2015)

    Article  CAS  Google Scholar 

  31. Hübschle, C.B., Sheldrick, G.M., Dittrich, B.: ShelXle: a Qt graphical user interface for SHELXL. J. Appl. Crystallogr. 44, 1281 (2011)

    Article  CAS  Google Scholar 

  32. Senekal, U., Barton, B., Hosten, E.C.: Inclusion ability and selectivity of ethylenediamine derivatives for pyridine in the presence of methylpyridine isomers. J. Incl. Phenom. Macrocycl. Chem. (2019). https://doi.org/10.1007/s10847-019-00966-y

    Article  Google Scholar 

  33. Mercury 3.10.2 (Build 189770), https://www.ccdc.cam.ac.uk/mercury/. Accessed Dec 2019.

  34. Pivovar, A.M., Holman, K.T., Ward, M.D.: Shape-selective separation of molecular isomers with tunable hydrogen-bonded host frameworks. Chem. Mater. 13, 3018–3031 (2001)

    Article  CAS  Google Scholar 

  35. Barton, B., Dorfling, S.-L., Hosten, E.C.: Cyclohexanone-driven discriminatory behaviour change of host compound (+)-(2R,3R)-TETROL for the isomeric methylcyclohexanone guests. Cryst. Growth Des. 17, 6725–6732 (2017)

    Article  CAS  Google Scholar 

Download references

Acknowledgements

Financial support is acknowledged from the Nelson Mandela University and the National Research Foundation (NRF).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Benita Barton.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Electronic supplementary material

The crystallographic data for all complexes where suitable crystal quality was obtained were deposited at the Cambridge Crystallographic Data Centre {CCDC-1964563 [1,4-DAX•2(PYR)], 1964564 [1,4-DAX•2(DIO)], 1964565 [1,4-DAX•2(MOR)], 1964566 [1,4-DAX•2(PIP)], 1964567 [1,4-DAT•2(DIO)], 1918458 (OED•PYR) and 1918461 (SED•PYR). These data may be obtained free of charge via www.ccdc.cam.ac.uk/data_request/cif. A comprehensive table displaying the H⋯G and G⋯G interactions is provided in Table S1, and additional figures illustrating the classical intermolecular H-bonding interactions between 1,4-DAX and PIP (Figure S1a) and MOR (Figure S1b) may also be found here. Below is the link to the electronic supplementary material.

Supplementary file1 (DOCX 303 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Barton, B., Jooste, D.V., Senekal, U. et al. Four xanthenyl-derived compounds: a comparative investigation of their host behaviour in the presence potential saturated and unsaturated heterocyclic six-membered ring guest solvents. J Incl Phenom Macrocycl Chem 97, 217–229 (2020). https://doi.org/10.1007/s10847-020-00997-w

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10847-020-00997-w

Keywords

Navigation