Abstract
The European 1ST DataGrid project was a pioneer in identifying the medical imaging field as an application domain that can benefit from Grid technologies. This paper describes how and for which purposes medical imaging applications can be Grid-enabled. Applications that have been deployed on the DataGrid testbed and middleware are described. They relate to medical image manipulation, including image production, secured image storage, and image processing. Results show that Grid technologies are still in their youth to address all issues related to complex medical imaging applications. If the benefit of Grid enabling for some medical applications is clear, there remain opened research and technical issues to develop and integrate all necessary services.
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R. Acharya, R. Wasserman, J. Sevens and C. Hinojosa, “Biomedical Imaging Modalities: A Tutorial”, Computerized Medical Imaging and Graphics, Vol. 19, No. 1, pp. 3–25, 1995.
R. Alfieri, R. Cecchini, V. Ciaschini, L. dell’Agnello, A. Frohner, A. Gianoli, K. Lörentey and F. Spataro, “VOMS, an Authorization System for Virtual Organizations”, in Proceedings of the 1st European Across Grids Conference, 2003.
B. Allcock, J. Bester, J. Bresnahan, A. Chervenak, L. Foster, C. Kesselman, S. Meder, V. Nefedova, D. Quesnal and S. Tuecke, “Data Management and Transfer in High Performance Computational Grid Environments”, Parallel Computing Journal, Vol. 28, No. 5, pp. 749–771, 2002.
K. Assié, V. Breton, L. Buvat, C. Comtat, S. Jan, M. Krieguer, D. Lazaro, C. Morel, M. Rey, G. Santin, L. Simon, S. Staelens, D. Strul, J. Vieira and R. Van de Walle, “Monte Carlo Simulation in PET and SPECT Instrumentation Using GATE”, Nucl. Instr. and Methods, 2003.
H. Benoit-Cattin, F. Bellet, J. Montagnat and C. Odet, “Magnetic Resonance Imaging (MRI) Simulation on a Grid Computing Architecture”, in IEEE CGIGRID’03-BIOGRID’03, Tokyo, 2003, pp. 582–587.
BI-RADS Committee, Illustrated Breast Imaging Reporting and Data System. American College of Radiology: 1998.
U. Bick and K. Doi, Computer Aided Diagnosis Tutorial, CARS 2000 Tutorial on Computer Aided-Diagnosis. Hyatt Regency: San Francisco, USA, 2000.
J. Bittoun, J. Taquin and M. Sauzade, “A Computer Algorithm for the Simulation of any Nuclear Magnetic Resonance (NMR) Imaging Method”, Magnetic Resonance Imaging, Vol. 3, pp. 363–376, 1984.
A. Brenner, J. Kürsch and T. Noll, “Distributed Large-Scale Simulation of Magnetic Resonance Imaging”, Magnetic Resonance Materials in Biology, Physics, and Medicine, Vol. 5, pp. 129–138, 1997.
V. Breton, R. Medina and J. Montagnat, “DataGrid, Prototype of a Bioniedical Grid”, Methods MIMST, Vol. 42, No. 2, 2003.
B. Claerhout and G. De Moor, “Privacy Protection for Healthgrid Applications”, Methods of Information in Medicine Journal, 2004, to appear.
P. Coddington (ed.), Random Number Generators for Parallel Computers, 2nd edn, NHSE Review, 1996.
DICOM, “Digital Imaging and Communications in Medicine”, 1996. http://medical.nema.org/
H. Duque, J. Montagnat, J. Pierson, L. Brunie and I. Magnin, “DM2: A Distributed Medical Data Manager for Grids”, inBiogrid’03, Proceedings of the IEEE CCGrid03, Tokyo, Japan, 2003.
EDG, “European DataGrid IST Project, FP5”, January 2001–February 2004, 2001. http://www.edg.org/
EDG WP2, “Spitfire”, 2001. http://edg-wp2.web.cern.ch/edg-wp2/spitfire/
EGEE, “European IST project of the FP6, Enabling Grids for E-Science and Industry in Europe”, April 2004–March 2006, 2004. http://www.eu-egee.org/
D. Ferraiolo and D. Kuhn, “Role Based Access Control”, in 15th NIST-NCSC National Computer Security Conference, 1992, pp. 554–563.
I. Foster and C. Kesselman, “Globus: A Metacomputing Infrastructure Toolkit”, International Journal of Supercomputer Applications, Vol. 11, No. 2, pp. 115–128, 1997.
L. Foster, C. Kesselman, G. Tsudik and S. Tuecke, “A Security Architecture for Computational Grids”, in Proceedings of the 5th ACM Conference on Computer and Communications Security, San Francisco, CA, USA, 1998, pp. 83–92.
L. Foster, C. Kesselman and S. Tuecke, “The Anatomy of the Grid: Enabling Scalable Virtual Organizations”, International Journal of Supercomputer Applications, Vo. 15, No. 3, 2001.
HealthGrid, “HealthGrid Association”, 2003. http://www.healthgrid.org/
M. Heath, K.W. Bowyer and D. Kopans, “Current Status of the Digital Database for Screening Mammography”, in Digital Mammography, Kluwer Academic Publishers: pp. 457–460, 1998. http://marathon.csee.usf.edu/Mammography/ Database.html
H.K. Huang, PACS: Picture Archiving and Communication Systems in Biomedical Imaging. Hardcover, 1996.
S. Jan, G. Santin, D. Strul et al., “GATE (Geant4 Application for Tomographic Emission): A Simulation Toolkit for PET and SPECT”, Phys. Med. Biol., Vol. 49, pp. 4543–4561, 2004.
N. Karonis, B. Toonen and I. Foster, “MPICH-G2: A Grid-Enabled Implementation of the Message Passing Interface”, Journal of Parallel and Distributed Computing, Vol. 63, No. 5, pp. 551–563, 2003.
R.-S. Kwan, A.C. Evans and G.B. Pike, “An Extensible MRI Simulator for Post-Processing Evaluation”, in International Conference on Visualization in Biomedical Computing, VBC’96, 1996, pp. 135–140.
LSG-RG, “Global Grid Forum Life Sciences Grid Research Group”, 2003. http://forge.gridforum.org/projects/lsg-rg
L. Maigne, D. Hill, V. Breton et al., “Parallelization of Monte Carlo Simulations and Submission to a Grid Environment”, Parallel Processing Letters, Vol. 14, pp. 177–196, 2004.
J. Montagnat, V. Breton and M. I.E., “Partitionning Medical Image Databases for Content-Based Queries on a Grid”, in Healthgrid’04, Clermont-Ferrand, France, 2004.
J. Montagnat, E. Davila and I. Magnin, “3D Objects Visualization for Remote Interactive Medical Applications”, in 3D Data Processing, Visualization, Transmission, Padova, Italy, 2002.
M.B.E. Olsson, R. Wirestam and B.R.R. Persson, “A Computer-Simulation Program for Mr-Imaging – Application to Rf and Static Magnetic-Field Imperfections”, Magnetic Resonance in Medicine, Vol. 34, No. 4, pp. 612–617, 1995.
L. Pearlman, V. Welch, L. Foster, C. Kesselman and S. Tuecke, “A Community Authorization Service for Group Collaboration”, in Proceedings of the 2002 IEEE Workshop on Policies for Distributed Systems and Networks, 2002.
G. Penney, J. Weese, J. Little, P. Desniedt, D. Hill and D. Hawkes, “A Comparison of Similarity Measures for Use in 2D-3D Medical Image Registration”, in Medical Image Computing and Computer-Assisted Intervention (MICCAI), LNCS, Vol. 1496. Springer: Cambridge, USA, pp. 1153–1161, 1998.
G. Santin, D. Strul, D. Lazaro, L. Simon, M. Krieguer, M. Vieira Martins, V. Breton and M. C., “GATE, a Geant4-Based Simulation Platform for PET and SPECT Integrating Movement and Time Managment”, IEEE Trans. Nucl. Sci., Vol. 50, pp. 1516–1521, 2003.
L. Seitz, J. Pierson and L. Brunie, “Key Management for Encrypted Data Storage in Distributed Systems”, in Proceedings of the 2nd Security in Storage Workshop (SISW), 2003.
L. Seitz, J. Pierson and L. Brunie, “Semantic Access Control for Medical Applications in Grid environments”, in Euro-Par 2003 Parallel Processing, LNCS, Vol. 2790, Springer: pp. 374–383, 2003.
G. Torheim, P. Rinck, R. Jones and J. Kvaerness, “A Simulator for Teaching MR, Image Contrast Behavior”, MAGMA, Vol. 2, pp. 515–522, 1994.
M. Traore and D. Hill, “The Use of Random Number Generation for Stochastic Distributed Simulation: Application to Ecological Modeling”, in 13th European Simulation Symposium, Marseille, France, 2001, pp. 555–559.
T. Tweed and S. Miguet, “Automatic Detection of Regions of Interest in Mammographies Based on a Combined Analysis of Texture and Histogram”, in International Conference on Pattern Recognition, Qubec City, Canada, 2002, pp. 448–552.
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Montagnat, J., Bellet, F., Benoit-Cattin, H. et al. Medical Images Simulation, Storage, and Processing on the European DataGrid Testbed. J Grid Computing 2, 387–400 (2004). https://doi.org/10.1007/s10723-004-5744-y
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DOI: https://doi.org/10.1007/s10723-004-5744-y