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Detection of quantitative trait loci controlling UV-B resistance in soybean

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Abstract

The depletion of stratospheric ozone has resulted in increased amounts of ultraviolet-B radiation (UV-B: 280–320 nm) reaching the Earth’s surface. Even a small increase in the incident UV-B radiation could cause significant biological effects in plants. In this study, we identified putative quantitative trait loci (QTL) associated with the resistance to enhanced UV-B radiation in soybean. A population of 115 recombinant inbred lines (RILs) derived from a cross between Keunolkong (a sensitive soybean variety) and Iksan 10 (a resistance soybean line) was analyzed. A total of 110 SSR markers were used to construct a linkage map. RILs and both parents were grown with supplemental UV-B radiation in a greenhouse. In order to screen for UV-B resistance, the degree of leaf chlorosis (DLC), degree of leaf shape change (DLS), degree of petiole color change (DPC) and degree of total plant damage (DTP) were evaluated. Using composite interval mapping analysis, one major QTL associated with all of the characteristics, DLC, DLS, DPC, and DTP, was detected on soybean chromosome 19 between Satt495 and Satt238, accounting for 10.76–32.8 % of the phenotypic variance. The ‘Iksan 10’ allele increased the resistance to UV-B radiation for the DLC, DLS, DPC, and DTP traits. This study is the first trial for identification of QTLs associated with UV-B resistance in soybean. In addition, these results provided basic information not only for the improvement of UV-B resistance through marker-assisted selection, but also for the future identification of putative candidate genes of UV-B resistance.

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References

  • Baroniya SS, Kataria S, Pandey GP, Guruprasad KN (2011) Intraspecific variation in sensitivity to ambient ultraviolet-B radiation in growth and yield characteristics of eight soybean cultivars grown under field conditions. Brazilian J Plant Physiol 23:197–202

    CAS  Google Scholar 

  • Blumthaler M, Ambach W (1990) Indication of increasing solar ultraviolet-B radiation flux in alpine regions. Science 248(4952):206–208. doi:10.2307/2873934

    Article  CAS  PubMed  Google Scholar 

  • Caldwell MM, Teramura AH, Tevini M (1989) The changing solar ultraviolet climate and the ecological consequences for higher plants. Trends Ecol Evol 4(12):363–367. doi:10.1016/0169-5347(89)90100-6

    Article  CAS  PubMed  Google Scholar 

  • Choudhary KK, Agrawal SB (2014a) Cultivar specificity of tropical mung bean (Vigna radiata L.) to elevated ultraviolet-B: Changes in antioxidative defense system, nitrogen metabolism and accumulation of jasmonic and salicylic acids. Environ Exp Botany 99:122–132. doi:10.1016/j.envexpbot.2013.11.006

    Article  CAS  Google Scholar 

  • Choudhary KK, Agrawal SB (2014b) Ultraviolet-B induced changes in morphological, physiological and biochemical parameters of two cultivars of pea (Pisum sativum L.). Ecotoxicol Environ Safety 100:178–187. doi:10.1016/j.ecoenv.2013.10.032

    Article  CAS  PubMed  Google Scholar 

  • Correia CM, Areal ELV, Torres-Pereira MS, Torres-Pereira JMG (1998) Intraspecific variation in sensitivity to ultraviolet-B radiation in maize grown under field conditions. I. Growth and morphological aspects. Field Crops Res 59(2):81–89. doi:10.1016/S0378-4290(98)00102-6

    Article  Google Scholar 

  • D’Surney SJ, Tschaplinski TJ, Edwards NT, Shugart LR (1993) Biological responses of two soybean cultivars exposed to enhanced UVB radiation. Environ Exp Botany 33(3):347–356. doi:10.1016/0098-8472(93)90036-F

    Article  Google Scholar 

  • Hidema J, Kumagai T (2006) Sensitivity of Rice to Ultraviolet-B Radiation. Ann Bot 97(6):933–942. doi:10.1093/aob/mc1044

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Hidema J, Zhang W, Yamamoto M, Sato T, Kumagai T (2005) Changes in grain size and grain storage protein of rice (Oryza Sativa L.) in response to elevated UV-B radiation under outdoor conditions. J Radiat Res 46(2):143–149. doi:10.1269/jrr.46.143

    Article  PubMed  Google Scholar 

  • Hidema J, Taguchi T, Ono T, Teranishi M, Yamamoto K, Kumagai T (2007) Increase in CPD photolyase activity functions effectively to prevent growth inhibition caused by UVB radiation. Plant J 50(1):70–79. doi:10.1111/j.1365-313X.2007.03041.x

    Article  CAS  PubMed  Google Scholar 

  • Hollósy F (2002) Effects of ultraviolet radiation on plant cells. Micron 33(2):179–197. doi:10.1016/S0968-4328(01)00011-7

    Article  PubMed  Google Scholar 

  • Kakani VG, Reddy KR, Zhao D, Sailaja K (2003) Field crop responses to ultraviolet-B radiation: a review. Agric Forest Meteorol 120(1–4):191–218. doi:10.1016/j.agrformet.2003.08.015

    Article  Google Scholar 

  • Kang S-T, Kwak M, Kim H-K, Choung M-G, Han W-Y, Baek I-Y, Kim M, Van K, Lee S-H (2009) Population-specific QTLs and their different epistatic interactions for pod dehiscence in soybean [Glycine max (L.) Merr.]. Euphytica 166(1):15–24. doi:10.1007/s10681-008-9810-6

    Article  Google Scholar 

  • Keim P, Olson TC, Shoemaker RC (1988) A rapid protocol for isolating soybean DNA. Soybean Genet Newsl 15:150–154

    Google Scholar 

  • Kim HK, Kang ST, Suh DY (2005) Analysis of quantitative trait loci associated with leaflet types in two recombinant inbred lines of soybean. Plant Breed 124(6):582–589. doi:10.1111/j.1439-0523.2005.01152.x

    Article  CAS  Google Scholar 

  • Kosambi DD (1944) The estimation of map distances from recombination values. Ann Eugen 12:172–175

    Article  Google Scholar 

  • Li L, Huang Q, Zhang S, Zhao S (2013) Effect of enhanced UV-B radiation and low-energy N + Ion beam radiation on the response of photosynthesis, antioxidant enzymes, and lipid peroxidation in rice (Oryza sativa) seedlings. Appl Biochem Biotechnol 171(4):1072–1083. doi:10.1007/s12010-013-0361-5

    Article  CAS  PubMed  Google Scholar 

  • Manly KF, Cudmore JRH, Meer JM (2001) Map Manager QTX, cross-platform software for genetic mapping. Mamm Genome 12(12):930–932. doi:10.1007/s00335-001-1016-3

    Article  CAS  PubMed  Google Scholar 

  • Reed HE, Teramura AH, Kenworthy WJ (1992) Ancestral U.S. soybean cultivars characterized for tolerance to ultraviolet-B radiation. Crop Sci 32(5):1214–1219. doi:10.2135/cropsci1992.0011183X003200050031x

    Article  Google Scholar 

  • Suh HS, Shin IY, Baek IY, Park CK, Kim YC, Lee JM, Lee SK (1992) A new high yielding summer soybean variety “Keunolkong”. RDA J Agric Sci 34:16–19

    Google Scholar 

  • Sullivan JH, Teramura AH (1990) Field study of the interaction between solar ultraviolet-B radiation and drought on photosynthesis and growth in soybean. Plant Physiol 92(1):141–146. doi:10.1104/pp.92.1.141

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Taalas P, Kaurola J, Kylling A, Shindell D, Sausen R, Dameris M, Grewe V, Herman J, Damski J, Steil B (2000) The impact of greenhouse gases and halogenated species on future solar UV radiation doses. Geophys Res Lett 27(8):1127–1130. doi:10.1029/1999gl010886

    Article  CAS  Google Scholar 

  • Teramura AH, Caldwell MM (1981) Effects of ultraviolet-B irradiances on soybean. IV. Leaf ontogeny as a factor in evaluating ultraviolet-B irradiance effects on net photosynthesis. Am J Bot 68(7):934–941. doi:10.2307/2443224

    Article  CAS  Google Scholar 

  • Teramura AH, Biggs RH, Kossuth S (1980) Effects of ultraviolet-B irradiances on soybean. II. Interaction between ultraviolet-B and photosynthetically active radiation on net photosynthesis dark respiration, and transpiration. Plant Physiol 65:483–488. doi:10.1104/pp.65.3.483

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Teramura AH, Sullivan JH, Lydon J (1990) Effects of UV-B radiation on soybean yield and seed quality: a 6 year field study. Physiol Plant 80(1):5–11. doi:10.1111/1399-3054.ep12724768

    Article  Google Scholar 

  • Teranishi M, Iwamatsu Y, Hidema J, Kumagai T (2004) Ultraviolet-B sensitivities in japanese lowland rice cultivars: cyclobutane pyrimidine dimer photolyase activity and gene mutation. Plant Cell Physiol 45(12):1848–1856. doi:10.1093/pcp/pch215

    Article  CAS  PubMed  Google Scholar 

  • Ueda T, Sato T, Hidema J, Hirouchi T, Yamamoto K, Kumagai T, Yano M (2005) qUVR-10, a major quantitative trait locus for ultraviolet-B resistance in rice Encodes cyclobutane pyrimidine dimer photolyase. Genetics 171(4):1941–1950. doi:10.1534/genetics.105.044735

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Wang S, Basten CJ, Zeng ZB (2011) Windows QTL Cartographer 2.5. Department of statistics. North Carolina State University, Raleigh

    Google Scholar 

  • Wargent JJ, Jordan BR (2013) From ozone depletion to agriculture: understanding the role of UV radiation in sustainable crop production. New Phytol 197(4):1058–1076. doi:10.1111/nph.12132

    Article  CAS  PubMed  Google Scholar 

  • Xu C, Sullivan JH, Garrett WM, Caperna TJ, Natarajan S (2008) Impact of solar ultraviolet-B on the proteome in soybean lines differing in flavonoid contents. Phytochemistry 69(1):38–48. doi:10.1016/j.phytochem.2007.06.010

    Article  CAS  PubMed  Google Scholar 

  • Yanqun Z, Yuan L, Haiyan C, Jianjun C (2003) Intraspecific differences in physiological response of 20 soybean cultivars to enhanced ultraviolet-B radiation under field conditions. Environ Exp Botany 50(1):87–97. doi:10.1016/S0098-8472(03)00004-2

    Article  Google Scholar 

  • Yuan L, Yanqun Z, Haiyan C, Jianjun C, Jilong Y, Zhide H (2000) Intraspecific responses in crop growth and yield of 20 wheat cultivars to enhanced ultraviolet-B radiation under field conditions. Field Crops Res 67(1):25–33. doi:10.1016/S0378-4290(00)00080-0

    Article  Google Scholar 

  • Zuk-Golaszewska K, Upadhyaya MK, Golaszewski J (2003) The effect of UV-B radiation on plant growth and development. Plant Soil Environ 49(3):135–140

    Google Scholar 

Download references

Acknowledgments

The present research was supported by the research fund of Dankook University in 2012.

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Correspondence to Sung-Taeg Kang.

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H.C. Shim and B.K. Ha contributed equally to this work.

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Shim, HC., Ha, BK., Yoo, M. et al. Detection of quantitative trait loci controlling UV-B resistance in soybean. Euphytica 202, 109–118 (2015). https://doi.org/10.1007/s10681-014-1233-y

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