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Development of novel palbociclib-based CDK4/6 inhibitors exploring the back pocket behind the gatekeeper

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Summary

CDK4/6 inhibitors plus endocrine therapy is a standard therapy for HR+/HER2- breast cancer. Herein, using structure-based drug design strategy, a novel series of palbociclib derivatives were designed and synthesized as CDK4/6 inhibitors, among which compound 17m exhibited more potent CDK4/6 inhibitory activity and in vitro antiproliferative activity against the phosphorylated Rb-positive cell line MDA-MB-453 than the approved drug palbociclib. Moreover, compound 17m possessed remarkable CDK4/6 selectivity over other CDK family members including CDK1, CDK2, CDK3, CDK5, CDK7 and CDK9. The potent and selective CDK4/6 inhibitory activity endowed compound 17m with robust G1 cell cycle arrest ability in MDA-MB-453 cells. The intracellular inhibition of CDK4/6 by 17m was confirmed by western blot analysis of the levels of phosphorylated Rb in MDA-MB-453 cells. With respect to the metabolic stability, compound 17m possessed longer half-life (t1/2) in mouse liver microsome than palbociclib.

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References

  1. Douglas H, Robert AW (2000) The hallmarks of cancer. Cell 100(1):57–70

    Article  Google Scholar 

  2. Asghar U, Witkiewicz AK, Turner NC, Knudsen ES (2015) The history and future of targeting cyclin-dependent kinases in cancer therapy. Nat Rev Drug Discov 14(2):130–146

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Malumbres M, Barbacid M (2009) Cell cycle, CDKs and cancer: a changing paradigm. Nat Rev Cancer 9(3):153–166

    Article  CAS  PubMed  Google Scholar 

  4. Yuan K, Wang X, Dong H, Min W, Hao H, Yang P (2020) Selective inhibition of CDK4/6: A safe and effective strategy for developing anticancer drugs. Acta Pharm Sin B 11(1):30–54

    Article  PubMed  PubMed Central  Google Scholar 

  5. Sherr CJ, Beach D, Shapiro GI (2016) Targeting CDK4 and CDK6: From Discovery to Therapy. Cancer Discov 6(4):353–367

    Article  CAS  PubMed  Google Scholar 

  6. Kwapisz D (2017) Cyclin-dependent kinase 4/6 inhibitors in breast cancer: palbociclib, ribociclib, and abemaciclib. Breast Cancer Res Treat 166(1):41–54

    Article  CAS  PubMed  Google Scholar 

  7. Corona SP, Ravelli A, Cretella D, Cappelletti MR, Zanotti L, Dester M et al (2017) CDK4/6 inhibitors in HER2-positive breast cancer. Crit Rev Oncol Hematol 112:208–214

    Article  PubMed  Google Scholar 

  8. Toogood PL, Harvey PJ, Repine JT, Sheehan DJ, VanderWel SN, Zhou H et al (2005) Discovery of a potent and selective inhibitor of cyclin-dependent kinase 4/6. J Med Chem 48(7):2388–2406

    Article  CAS  PubMed  Google Scholar 

  9. Sohita D (2015) Palbociclib: first global approval. Drugs 75:543–551

    Article  Google Scholar 

  10. Shi C, Wang Q, Liao X, Ge H, Huo G, Zhang L et al (2020) Discovery of a novel series of imidazo[1’,2’:1,6]pyrido[2,3-d]pyrimidin derivatives as potent cyclin-dependent kinase 4/6 inhibitors. Eur J Med Chem 193:112239

    Article  CAS  PubMed  Google Scholar 

  11. Sunshine lake pharma (2016) Compounds as CDK small-molecule inhibitors and uses thereof. WOCN15084983

  12. Shanghai hengrui pharmaceutical (2014) Thiophene miazines derivate, preparation method thereof and medical application thereof. WOCN14075387

  13. Sunshine lake pharma (2016) 2-amino-pyrido[2,3-D]pyrimidin-7(8H)-one derivatives as CDK inhibitors and uses thereof. WOCN15084984

  14. Wang P, Huang J, Wang K, Gu Y (2016) New palbociclib analogues modified at the terminal piperazine ring and their anticancer activities. Eur J Med Chem 122:546–556

    Article  CAS  PubMed  Google Scholar 

  15. Chen P, Lee NV, Hu W, Xu M, Ferre RA, Lam H et al (2016) Murray 4 Spectrum and Degree of CDK Drug Interactions Predicts Clinical Performance. Mol Cancer Ther 15(10):2273–2281

    Article  PubMed  Google Scholar 

  16. Tvorogov D, Thomas D, Liau NPD, Dottore M, Barry EF, Lathi M et al (2018) Accumulation of JAK activation loop phosphorylation is linked to type I JAK inhibitor withdrawal syndrome in myelofibrosis. Sci Adv 4:eaat3834

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Meyer SC, Keller MD, Chiu S, Koppikar P, Guryanova OA, Rapaport F et al (2015) CHZ868, a Type II JAK2 inhibitor, reverses type I JAK inhibitor persistence and demonstrates efficacy in myeloproliferative neoplasms. Cancer Cell 28:15–28

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  18. Liu CY, Lau KY, Hsu CC, Chen JL, Lee CH, Huang TT et al (2017) Combination of palbociclib with enzalutamide shows in vitro activity in RB proficient and androgen receptor positive triple negative breast cancer cells. PLoS One 12(12):e0189007

    Article  PubMed  PubMed Central  Google Scholar 

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Funding

This study was funded by grants from the National Natural Science Foundation of China (Grant No. 82073872).

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XX and LLN designed the project. LMZ and JW performed the enzymatic screening; LYX and CFQ synthesized the molecules; WYJ and LY performed the in vitro experiments. XX analyzed the data and wrote the manuscript.

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Correspondence to Xia Xue.

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Li, L., Chen, F., Li, M. et al. Development of novel palbociclib-based CDK4/6 inhibitors exploring the back pocket behind the gatekeeper. Invest New Drugs 41, 638–651 (2023). https://doi.org/10.1007/s10637-023-01385-0

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  • DOI: https://doi.org/10.1007/s10637-023-01385-0

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