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PpNrg1 is a transcriptional repressor for glucose and glycerol repression of AOX1 promoter in methylotrophic yeast Pichia pastoris

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Abstract

Objective

The regulator in glycerol repression of Pichia pastoris AOX1 promoter (P AOX1 ) is still unclear.

Results

A Cys2His2 zinc finger transcriptional repressor PpNrg1 localized to nucleus and participated in the repression of P AOX1 in P. pastoris in glucose and glycerol. Quantitative real-time PCR revealed that PpNrg1 repressed expression of numerous genes involved in methanol utilization and peroxisome biogenesis in 0.02 % glucose and 1 % (v/v) glycerol. Electrophoretic mobility shift assay and DNase I footprinting assay revealed that PpNrg1 bound to five sites of P AOX1 , including two binding sites of PpMxr1, which is an indispensable activator of P AOX1 in P. pastoris.

Conclusion

Transcriptional repressor PpNrg1 suppresses P AOX1 in glucose and glycerol by directly binding to five sites of P AOX1 , including two binding sites of transcriptional activator PpMxr1.

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References

  • Berkey CD, Vyas VK, Carlson M (2004) Nrg1 and Nrg2 transcriptional repressors are differently regulated in response to carbon source. Eukaryot Cell 3:311–317

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Gellissen G (2000) Heterologous protein production in methylotrophic yeasts. Appl Microbiol Biotechnol 54:741–750

    Article  CAS  PubMed  Google Scholar 

  • Hartner FS, Glieder A (2006) Regulation of methanol utilisation pathway genes in yeasts. Microb Cell Fact 5:39

    Article  PubMed  PubMed Central  Google Scholar 

  • Kranthi BV, Kumar V, Rajendra H, Rangarajan PN (2010) Identification of Mxr1p-binding sites in the promoters of genes encoding dihydroxyacetone synthase and peroxin 8 of the methylotrophic yeast Pichia pastoris. Yeast 27:705–711

    Article  CAS  PubMed  Google Scholar 

  • Krasovska OS, Stasyk OG, Nahorny VO, Stasyk OV, Granovski N, Kordium VA, Vozianov OF, Sibirny AA (2007) Glucose-induced production of recombinant proteins in Hansenula polymorpha mutants deficient in catabolite repression. Biotechnol Bioeng 97:858–870

    Article  CAS  PubMed  Google Scholar 

  • Lee SB, Kang HS, Kim T (2013) Nrg1 functions as a global transcriptional repressor of glucose-repressed genes through its direct binding to the specific promoter regions. Biochem Biophys Res Commun 439:501–505

    Article  CAS  PubMed  Google Scholar 

  • Park SH, Koh SS, Chun JH, Hwang HJ, Kang HS (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19:2044–2050

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Polupanov AS, Nazarko VY, Sibirny AA (2012) Gss1 protein of the methylotrophic yeast Pichia pastoris is involved in glucose sensing, pexophagy and catabolite repression. Int J Biochem Cell Biol 44:1906–1918

    Article  CAS  PubMed  Google Scholar 

  • Porro D, Sauer M, Branduardi P, Mattanovich D (2005) Recombinant protein production in yeasts. Mol Biotechnol 31:245–259

    Article  CAS  PubMed  Google Scholar 

  • Stadlmayr G, Benakovitsch K, Gasser B, Mattanovich D, Sauer M (2010) Genome-scale analysis of library sorting (GALibSo): Isolation of secretion enhancing factors for recombinant protein production in Pichia pastoris. Biotechnol Bioeng 105:543–555

    Article  CAS  PubMed  Google Scholar 

  • Stasyk OG, Van Zutphen T, Kang HA, Stasyk OV, Veenhuis M, Sibirny AA (2007) The role of Hansenula polymorpha MIG1 homologues in catabolite repression and pexophagy. FEMS Yeast Res 7:1103–1113

    Article  CAS  PubMed  Google Scholar 

  • Stasyk OV, Nazarko TY, Sibirny AA (2008) Methods of plate pexophagy monitoring and positive selection for ATG gene cloning in yeasts. Methods Enzymol 451:229–239

    Article  CAS  PubMed  Google Scholar 

  • Vogl T, Hartner FS, Glieder A (2013) New opportunities by synthetic biology for biopharmaceutical production in Pichia pastoris. Curr Opin Biotechnol 24:1094–1101

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Xuan YJ, Zhou XS, Zhang WW, Zhang X, Song ZW, Zhang YX (2009) An upstream activation sequence controls the expression of AOX1 gene in Pichia pastoris. FEMS Yeast Res 9:1271–1282

    Article  CAS  PubMed  Google Scholar 

  • Zhai ZY, Yurimoto H, Sakai Y (2012) Molecular characterization of Candida boidinii MIG1 and its role in the regulation of methanol-inducible gene expression. Yeast 29:293–301

    Article  CAS  PubMed  Google Scholar 

  • Zhang P, Zhang WW, Zhou XS, Bai P, Cregg JM, Zhang YX (2010) Catabolite repression of Aox in Pichia pastoris is dependent on hexose transporter PpHxt1 and pexophagy. Appl Environ Microbiol 76:6108–6118

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Zianni M, Tessanne K, Merighi M, Laguna R, Tabita FR (2006) Identification of the DNA bases of a DNase I footprint by the use of dye primer sequencing on an automated capillary DNA analysis instrument. J Biomol Tech 17:103–113

    PubMed  PubMed Central  Google Scholar 

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Acknowledgments

This work was supported by Chinese National High Technology Research and Development Program (No. 2014AA093501), National Special Fund for State Key Laboratory of Bioreactor Engineering (No. 2060204), and Grants of Young and Middle-aged Leading Science and Technology Innovation Talents from Ministry of Science and Technology of China.

Supporting information

Supplementary Table 1—Oligonucleotide primers used in this study.

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Correspondence to Menghao Cai.

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Wang, X., Cai, M., Shi, L. et al. PpNrg1 is a transcriptional repressor for glucose and glycerol repression of AOX1 promoter in methylotrophic yeast Pichia pastoris . Biotechnol Lett 38, 291–298 (2016). https://doi.org/10.1007/s10529-015-1972-4

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  • DOI: https://doi.org/10.1007/s10529-015-1972-4

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