Skip to main content
Log in

Applying trait-function relationships for microbial plant decomposition to predict medium longevity in pollution control biofilters

  • Environmental biotechnology
  • Published:
Applied Microbiology and Biotechnology Aims and scope Submit manuscript

Abstract

Biofilters, bioreactors used for pollution control, can effectively treat a variety of odorous and hazardous emissions, but uncertain medium longevities and associated costs limit biofilter adoption. To improve medium-life estimations for biofilter end-users, litter bags were used to compare decay rates of common biofilter medium types and test the effects of nitrogen (N) enrichment and livestock production emissions on medium decay in a full-scale biofilter over a 27-month period. Generally, “by-product” media (mulch, corn cobs) decayed faster than hardwood media, with decay of softwood media the slowest. Analysis showed nutrient content was the best predictor of early-stage decay, while carbon fractions and nutrient content best predicted medium longevity. N amendments and N-rich barn emissions were found to hasten medium decay. By identifying decay rates and rate predictors specific for biofilter media, we provide biofilter engineers and farmers with a quantitative way to improve medium selection based on the trade-offs between medium cost and replacement frequency.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Akdeniz N, Janni KA, Salnikov IA (2011) Biofilter performance of pine nuggets and lava rock as media. Bioresource Technol 102(8):4974–4980

    Article  CAS  Google Scholar 

  • Akdeniz N, Janni KA, Hetchler BP (2014) Mitigation of multiple air emissions from swine buildings using corn cob biofilters. In: American Society of Agricultural and Biological Engineers Annual International Meeting 2014, ASABE 2014, Montreal, Canada. American Society of Agricultural and Biological Engineers, St. Joseph, MI, pp 902–909. doi:10.13031/aim.20141894244

    Google Scholar 

  • Berbeco M, Melillo J, Orians C (2012) Soil warming accelerates decomposition of fine woody debris. Plant Soil 356(1–2):405–417

    Article  CAS  Google Scholar 

  • Boddy L, Heilmann-Clausen J (2008) Basidiomycete community development in temperate angiosperm wood. In: Boddy L, Frankland JC, van West P (eds) British Mycological Society Symposia Series, vol 28, Ecology of saprotrophic basidiomycetes. Academic, London, UK, pp 211–237

    Google Scholar 

  • Cabrol L, Malhautier L (2011) Integrating microbial ecology in bioprocess understanding: the case of gas biofiltration. Appl Microbiol Biotechnol 90(3):837–849

    Article  CAS  PubMed  Google Scholar 

  • Chen L, Hoff S (2009) Mitigating odors from agricultural facilities: a review of literature concerning biofilters. Appl Eng Agric 25(5):751–766

    Article  Google Scholar 

  • Chen L, Hoff S, Lingshuang C, Koziel J, Zelle B (2009) Evaluation of wood chip-based biofilters to reduce odor, hydrogen sulfide, and ammonia from swine barn ventilation air. J Air Waste Manag Assoc 59(5):520–530

    Article  CAS  PubMed  Google Scholar 

  • Cornwell WK, Weedon JT (2014) Decomposition trajectories of diverse litter types: a model selection analysis. Methods Ecol Evol 5(2):173–182

    Article  Google Scholar 

  • Delhomenie MC, Heitz M (2005) Biofiltration of air: a review. Crit Rev Biotechnol 25(1–2):53–72

    Article  CAS  PubMed  Google Scholar 

  • Dorado AD, Lafuente FJ, Gabriel D, Gamisans X (2010a) A comparative study based on physical characteristics of suitable packing materials in biofiltration. Environ Technol 31(2):193–204

    Article  CAS  PubMed  Google Scholar 

  • Dorado AD, Lafuente J, Gabriel D, Gamisans X (2010b) The role of water in the performance of biofilters: parameterization of pressure drop and sorption capacities for common packing materials. J Hazard Mater 180:693–702

    Article  CAS  PubMed  Google Scholar 

  • Fasth BG, Harmon ME, Sexton J, White P (2011) Decomposition of fine woody debris in a deciduous forest in North Carolina. J Torrey Bot Soc 138(2):192–206

    Article  Google Scholar 

  • Forest Products Laboratory (2010) Wood handbook—wood as an engineering material. General Technical Report FPL-GTR-190. U.S. Department of Agriculture, Forest Service, Forest Products Laboratory, Madison, WI

    Google Scholar 

  • Freschet GT, Weedon JT, Aerts R, van Hal JR, Cornelissen JHC (2012) Interspecific differences in wood decay rates: insights from a new short-term method to study long-term wood decomposition. J Ecol 100(1):161–170

    Article  Google Scholar 

  • Harmon ME, Krankina ON, Sexton J (2000) Decomposition vectors: a new approach to estimating woody detritus decomposition dynamics. Can J For Res-Rev Can Rech For 30(1):76–84

    Article  Google Scholar 

  • Hiscox J, Savoury M, Vaughan IP, Muller CT, Boddy L (2015) Antagonistic fungal interactions influence carbon dioxide evolution from decomposing wood. Fungal Ecol 14:24–32

    Article  Google Scholar 

  • Hobbie S, Baker L, Buyarski C, Nidzgorski D, Finlay J (2014) Decomposition of tree leaf litter on pavement: implications for urban water quality. Urban Ecosyst 17(2):369–385

    Article  Google Scholar 

  • Janni KA, Jacobson LD, Hetchler BP, Oliver JP, Johnston LJ (2014) Semi-continuous air sampling versus 24-hour bag samples to evaluate biofilters on a swine nursery in warm weather. Trans ASABE 57(5):1501–1515

    Google Scholar 

  • Kennes C, Veiga MC (2004) Fungal biocatalysts in the biofiltration of VOC-polluted air. J Biotechnol 113(1–3):305–319

    Article  CAS  PubMed  Google Scholar 

  • Knorr M, Frey SD, Curtis PS (2005) Nitrogen additions and litter decomposition: a meta-analysis. Ecology 86(12):3252–3257

    Article  Google Scholar 

  • Lazarus W (2013) Feedlot Air Emissions Treatment Cost Calculator. http://www.extension.org/pages/67055/feedlot-air-emissions-treatment-cost-calculator#.VZrZ7fm6e70

  • Lebrero R, Estrada JM, Muñoz R, Quijano G (2014) Deterioration of organic packing materials commonly used in air biofiltration: effect of VOC-packing interactions. J Environ Manage 137:93–100

    Article  CAS  PubMed  Google Scholar 

  • Motulsky HJ, Ransnas LA (1987) Fitting curves to data using nonlinear-regression—a practical and nonmathematical review. Faseb J 1(5):365–374

    CAS  PubMed  Google Scholar 

  • Mudliar S, Giri B, Padoley K, Satpute D, Dixit R, Bhatt P, Pandey R, Juwarkar A, Vaidya A (2010) Bioreactors for treatment of VOCs and odour—a review. J Environ Manage 91:1039–1054

    Article  CAS  PubMed  Google Scholar 

  • Nordin A, Uggla C, Nasholm T (2001) Nitrogen forms in bark, wood and foliage of nitrogen-fertilized Pinus sylvestris. Tree Physiol 21(1):59–64

    Article  CAS  PubMed  Google Scholar 

  • Pietsch KA, Ogle K, Cornelissen JHC, Cornwell WK, Bönisch G, Craine JM, Jackson BG, Kattge J, Peltzer DA, Penuelas J, Reich PB, Wardle DA, Weedon JT, Wright IJ, Zanne AE, Wirth C (2014) Global relationship of wood and leaf litter decomposability: the role of functional traits within and across plant organs. Glob Ecol Biogeogr 23(9):1046–1057

    Article  Google Scholar 

  • Prenafeta-Boldú FX, Illa J, van Groenestijn JW, Flotats X (2008) Influence of synthetic packing materials on the gas dispersion and biodegradation kinetics in fungal air biofilters. Appl Microbiol Biotechnol 79(2):319–327

    Article  PubMed  Google Scholar 

  • Prenafeta-Boldú FX, Guivernau M, Gallastegui G, Viñas M, de Hoog GS, Elías A (2012) Fungal/bacterial interactions during the biodegradation of TEX hydrocarbons (toluene, ethylbenzene and p-xylene) in gas biofilters operated under xerophilic conditions. FEMS Microbiol Ecol 80(3):722–734

    Article  PubMed  Google Scholar 

  • Prescott CE (2010) Litter decomposition: what controls it and how can we alter it to sequester more carbon in forest soils? Biogeochemistry 101(1–3):133–149

    Article  CAS  Google Scholar 

  • Prescott CE, Vesterdal L, Preston CM, Simard SW (2004) Influence of initial chemistry on decomposition of foliar litter in contrasting forest types in British Columbia. Can J Forest Res 34(8):1714–1729

    Article  CAS  Google Scholar 

  • R Core Team (2015) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria, http://www.R-project.org/

    Google Scholar 

  • Ramirez-Lopez E, Hernandez JC, Dendooven L, Rangel P, Thalasso F (2003) Characterization of five agricultural by-products as potential biofilter carriers. Bioresource Technol 88(3):259–263

    Article  CAS  Google Scholar 

  • Robertson WD (2010) Nitrate removal rates in woodchip media of varying age. Ecol Eng 36(11):1581–1587

    Article  Google Scholar 

  • Russell M, Woodall C, Fraver S, D’Amato A, Domke G, Skog K (2014) Residence times and decay rates of downed woody debris biomass/carbon in Eastern US Forests. Ecosystems 17(5):765–777

    Article  CAS  Google Scholar 

  • Schilling JS, Ayres A, Kaffenberger JT, Powers JS (2015a) Initial white rot type dominance of wood decomposition and its functional consequences in a regenerating tropical dry forest. Soil Biol Bioch 88:58–68

    Article  CAS  Google Scholar 

  • Schilling JS, Kaffenberger JT, Liew FJ, Song Z (2015b) Signature wood modifications reveal decomposer community history. PLoS ONE 10(3), e0120679

    Article  PubMed Central  PubMed  Google Scholar 

  • Schipper LA, Robertson WD, Gold AJ, Jaynes DB, Cameron SC (2010) Denitrifying bioreactors: an approach for reducing nitrate loads to receiving waters. Ecol Eng 36(11):1532–1543

    Article  Google Scholar 

  • Schmidt D, Jacobson LD, Nicolai RE (2004) Biofilter design information. University of Minnesota Extension Service, Biosystems and Agricultural Engineering Update (BAEU) 18 http://www.extension.umn.edu/agriculture/manure-management-and-air-quality/air-quality/biofilter-design-information/

  • Vaiškūnaitė R, Navickaitė R (2011) Evaluation of the performance with biofilter effectiveness treating volatile organic compounds under different pH value. In: The 8th International Conference “Environmental Engineering”: Selected papers. Ed. by Čygas D, Froehner KD, May 19–20, 2011 Vilnius, Lithuania. Vilnius: Technika, pp 416–424, ISBN: 978-9955-28-831-2

  • Valenzuela-Solano C, Crohn DM (2006) Are decomposition and N release from organic mulches determined mainly by their chemical composition? Soil Biol Biochem 38(2):377–384

    Article  CAS  Google Scholar 

  • van Lith C, Leson G, Michelsen R (1997) Evaluating design options for biofilters. J Air Waste Manage Assoc 47(1):37–48

    Article  Google Scholar 

  • Veen GF, Freschet GT, Ordonez A, Wardle DA (2015) Litter quality and environmental controls of home-field advantage effects on litter decomposition. Oikos 124(2):187–195

    Article  Google Scholar 

  • Veillette M, Girard M, Viens P, Brzezinski R, Heitz M (2012) Function and limits of biofilters for the removal of methane in exhaust gases from the pig industry. Appl Microbiol Biotechnol 94(3):601–611

    Article  CAS  PubMed  Google Scholar 

  • Weedon JT, Cornwell WK, Cornelissen JHC, Zanne AE, Wirth C, Coomes DA (2009) Global meta-analysis of wood decomposition rates: a role for trait variation among tree species? Ecol Lett 12(1):45–56

    Article  PubMed  Google Scholar 

  • Wienhold BJ, Varvel GE, Jin VL (2011) Corn cob residue carbon and nutrient dynamics during decomposition. Agron J 103(4):1192–1197

    Article  Google Scholar 

  • Zhang DQ, Hui DF, Luo YQ, Zhou GY (2008) Rates of litter decomposition in terrestrial ecosystems: global patterns and controlling factors. J Plant Ecol 1(2):85–93

    Article  Google Scholar 

Download references

Acknowledgments

A special thanks to our collaborators, Dr. Kevin Janni, Dr. Larry Jacobson, and Brian Hetchler, for their biofilter expertise and to Dr. Justin Kaffenberger for his thoughtful discussion. These studies were supported by grants from the United States Department of Agriculture, National Institute of Food and Agriculture, Agriculture and Food Research Initiative (USDA/2010-85112-20520 and USDA/2012-69002-19880), and the USDA NIFA McIntire-Stennis Project #MIN-12-074 at the University of Minnesota.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Jonathan S. Schilling.

Ethics declarations

Conflict of interest

The authors declare that they have no competing interests.

Ethical approval

This article does not contain any studies with human participants or animals performed by any of the authors.

Electronic supplementary material

Below is the link to the electronic supplementary material.

ESM 1

(PDF 1618 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Oliver, J.P., Schilling, J.S. Applying trait-function relationships for microbial plant decomposition to predict medium longevity in pollution control biofilters. Appl Microbiol Biotechnol 100, 2843–2853 (2016). https://doi.org/10.1007/s00253-015-7134-8

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00253-015-7134-8

Keywords

Navigation