Skip to main content
Log in

Bacillus aerolatus sp. nov., a novel member of the genus Bacillus, isolated from bioaerosols in a school playground

  • Original Paper
  • Published:
Archives of Microbiology Aims and scope Submit manuscript

Abstract

A Gram-positive, endospore-forming, rod-shaped bacterium with a single flagellum, and a motile strain, designated CX253, was isolated from bioaerosols. The isolate is facultatively anaerobic, is able to grow at 25–45 ℃ (optimum 37 ℃) and pH 6.5–10.0 (optimum 7.5), and can tolerate up to 5.0% NaCl (w/v) under aerobic conditions. The diagnostic diamino acid in the cell wall of strain CX253T is meso-diaminopimelic acid, while major isoprenoid quinone is menaquinone 6 (MK-6) along with a smaller amount of MK-7 (20%). The polar lipid profile is composed of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phospholipids and glycolipids. The major cellular fatty acid is iso-C15:0 and anteiso-C15:0. Phylogenetic analysis based on 16S rRNA gene and genome sequence grouped strain CX253T into the genus Bacillus. The strain was most closely related to Bacillus thermotolerans CCTCC AB 2012108 T by comparison of 16S rRNA gene sequence (97.2% similarity) and to Bacillus wudalianchiensis CCTCC AB 2015266 T by comparison of gyrB gene sequence (80.1% similarity). The draft genome of strain CX253T comprised 3,929,195 bp with a G + C content of 43.3 mol%. The average nucleotide identity and digital DNA–DNA hybridization values between strain CX253T and phylogenetically related Bacillus species were lower than 95% and 70%, respectively. Thus, the polyphasic evidence generated through phenotypic, chemotaxonomic and genomic methods confirmed that strain CX253T (= GDMCC 1.1608 T = KACC 21318 T) was a novel species of the genus Bacillus, for which the name Bacillus aerolatus sp. nov. is proposed.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1

Similar content being viewed by others

References

  • Auch AF, von Jan M, Klenk HP, Göker M (2010) Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison. Stand Genomic Sci 2:117–134

    Article  PubMed  PubMed Central  Google Scholar 

  • Baker GC, Smith JJ, Cowan DA (2003) Review and reanalysis of domain-specific 16S primers. J Microbiol Methods 55:541–555

    Article  CAS  PubMed  Google Scholar 

  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, Pyshkin AV, Sirotkin AV, Vyahhi N, Tesler G, Alekseyev MA, Pevzner PA (2012) SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol 19:455–477

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Cohn F (1872) Untersuchungen über Bakterien. Beitr Biol Pflanz Heft 1:127–224

    Google Scholar 

  • Collins MD, Pirouz T, Goodfellow M, Minnikin DE (1977) Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100:221–230

    Article  CAS  PubMed  Google Scholar 

  • Dominguez-Moñino I, Jurado V, Gonzalez-Pimentel JL, Miller AZ, Hermosin B, Saiz-Jimenez C (2018) Bacillus onubensis sp. nov., isolated from the air of two Andalusian caves. Syst Appl Microbiol 41:167–172

    Article  PubMed  Google Scholar 

  • Dunlap CA, Schisler DA, Perry EB, Connor N, Cohan FM, Rooney AP (2017) Bacillus swezeyi sp. nov. and Bacillus haynesii sp. nov., isolated from desert soil. Int J Syst Evol Microbiol 67:2720–2725

    Article  CAS  PubMed  Google Scholar 

  • Faridi S, Hassanvand MS, Naddafi K, Yunesian M, Nabizadeh R, Hossein Sowlat M, Kashani H, Gholampour A, Niazi S, Zare A, Nazmara S, Alimohammadi M (2015) Indoor/outdoor relationships of bioaerosol concentrations in a retirement home and a school dormitory. Environ Sci Pollut Res Int 22:8190–8200

    Article  CAS  PubMed  Google Scholar 

  • Guo J, Wang YQ, Yang G, Chen Y, Zhou S, Zhao Y, Zhuang L (2016) Bacillus nitroreducens sp. nov., a humus-reducing bacterium isolated from a compost. Arch Microbiol 198:347–352

    Article  CAS  PubMed  Google Scholar 

  • Kämpfer P, Kroppenstedt RM (1996) Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbial 42:989–1005

    Article  Google Scholar 

  • Kim M, Oh HS, Park SC, Chun J (2014) Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. Int J Syst Evol Microbiol 64:346–351

    Article  CAS  PubMed  Google Scholar 

  • Kim KH, Kabir E, Jahan SA (2018) Airborne bioaerosols and their impact on human health. J Environ Sci 67:23–35

    Article  Google Scholar 

  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K (2018) MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol 35:1547–1549

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Liu Y, Lai Q, Dong C, Sun F, Wang L, Li G, Shao Z (2013) Phylogenetic diversity of the Bacillus pumilus group and the marine ecotype revealed by multilocus sequence analysis. PLoS ONE 8:e80097

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Liu B, Liu GH, Sengonca C, Schumann P, Wang JP, Zhu YJ, Zhang HF (2017) Bacillus wudalianchiensis sp. nov., isolated from grass soils of the Wudalianchi scenic area. Int J Syst Evol Microbiol 67:2897–2902

    Article  CAS  PubMed  Google Scholar 

  • Mawlankar R, Thorat MN, Krishnamurthi S, Dastager SG (2016) Bacillus cellulasensis sp. nov., isolated from marine sediment. Arch Microbiol 198:83–89

    Article  CAS  PubMed  Google Scholar 

  • Meier-Kolthoff JP, Auch AF, Klenk HP, Göker M (2013) Genome sequence-based species delimitation with confidence intervals and improved distance function. BMC Bioinform 60:471–2105

    Google Scholar 

  • Morakinyo OM, Mokgobu MI, Mukhola MS, Godobedzha T (2019) Biological composition of respirable particulate matter in an industrial vicinity in South Africa. Int J Environ Res Public Health 16:629

    Article  CAS  PubMed Central  Google Scholar 

  • Park C, Lee YS, Park SY, Park W (2018) Methylobacterium currus sp. nov., isolated from a car air conditioning system. Int J Syst Evol Microbiol 68:3621–3626

    Article  CAS  PubMed  Google Scholar 

  • Qi J, Wang B, Hao BL (2004) Whole proteome prokaryote phylogeny without sequence alignment: a K-String composition approach. J Mol Evol 58:1–11

    Article  CAS  PubMed  Google Scholar 

  • Ranmadugala D, Grainger M, Manley-Harris M, Berenjian A (2018) Determination of menaquinone-7 by a simplified reversed phase-HPLC method. Curr Pharm Biotechnol 19:664–673

    Article  CAS  PubMed  Google Scholar 

  • Richter M, Rosselló-Móra R (2009) Shifting the genomic gold standard for the prokaryotic species definition. Proc Natl Acad Sci USA 106:19126–19131

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Schaeffer AB, Fulton MD (1933) A simplified method of staining endospores. Science 77:194–194

    Article  CAS  PubMed  Google Scholar 

  • Shivaji S, Chaturvedi P, Begum Z, Pindi PK, Manorama R, Ananth Padmanaban D, Shouche YS, Pawar S, Vaishampayan P, Dutt CBS, Datta GN, Manchanda RK, Rao UR, Bhargava PM, Narlikar JV (2009) Janibacter hoylei sp. nov., Bacillus isronensis sp. nov. and Bacillus aryabhattai sp. nov., isolated from cryotubes used for collecting air from the upper atmosphere. Int J Syst Evol Microbiol 59:2977–2986

    Article  CAS  PubMed  Google Scholar 

  • Singh H, Kaur M, Kaur L, Sharma S, Mishra S, Srinivas Tanuku NR, Kumar PA (2018) Bacillus lacus sp. nov., isolated from a water sample of a salt lake in India. Int J Syst Evol Microbiol 68:801–809

    Article  CAS  PubMed  Google Scholar 

  • Sun W, Li W, Ji X, Li H, Qin K, Wei Y (2018) Cold-adapted bacterial diversity in Mingyong Glacier based on combination analysis of fatty acids and 16S rRNA gene sequence. Microbiology 87:842–847

    Article  CAS  Google Scholar 

  • Sun L, Chen Y, Tian W, Yao L, Chen Z, Ouyang WK (2019) Bacillus acidinfaciens sp. nov., isolated from farmland soil. Int J Syst Evol Microbiol 69:1075–1080

    Article  CAS  PubMed  Google Scholar 

  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Tindall BJ (1990) A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 13:128–130

    Article  CAS  Google Scholar 

  • Wang LT, Lee FL, Tai CJ, Kasai H (2007) Comparison of gyrB gene sequences, 16S rRNA gene sequences and DNA-DNA hybridization in the Bacillus subtilis group. Int J Syst Evol Microbiol 57:1846–1850

    Article  CAS  PubMed  Google Scholar 

  • Wei K, Zheng YH, Li J, Shen FX, Zou ZL, Fan HQ, Li XY, Wu CY, Yao MS (2014) Microbial aerosol characteristics in highly polluted and near pristine environments featuring different climatic conditions. Earth Sci 60:1439–1447

    Google Scholar 

  • Xu Z, Yao M (2013) Monitoring of bioaerosol inhalation risks in different environments using a six-stage Andersen sampler and the PCR-DGGE method. Environ Monit Assess 185:3993–4003

    Article  CAS  PubMed  Google Scholar 

  • Yamamoto S, Harayama S (1995) PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida Strains. Appl Environ Microbiol 61:1104–1109

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Yan D, Zhang T, Su J, Zhao LL, Wang H, Fang XM, Zhang YQ, Liu HY, Yu LY (2016) Diversity and composition of airborne fungal community associated with particulate matters in Beijing during haze and non-haze days. Front Microbiol 7:487

    PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgements

We thank Li Zhuang and Guiqin Yang (Guangdong Institute of Eco-Environmental and Soil Sciences) for support in reference strains and technical assistance. This work was supported by the National Science Foundation of China (NSFC 31500076), the Science and Technology Program of Guangzhou, China (201904010161) and Guangzhou Municipal Science and Technology Project (20191A011063).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to GuoXia Zhang.

Ethics declarations

Conflicts of interest

The authors declare that there are no conflicts of interest.

Additional information

Communicated by Erko Stackebrandt.

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

GenBank accession numbers: The GenBank accession numbers for 16S rRNA gene and genome sequence of strain CX253T are MN442345 and WEIO00000000, respectively.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary file1 (DOCX 1208 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Chen, P., Wang, D., Ren, Q. et al. Bacillus aerolatus sp. nov., a novel member of the genus Bacillus, isolated from bioaerosols in a school playground. Arch Microbiol 202, 2373–2378 (2020). https://doi.org/10.1007/s00203-020-01955-3

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00203-020-01955-3

Keywords

Navigation