Skip to main content
Log in

Extrachromosomal plasmids in the plant pathogenic fungus Rhizoctonia solani

  • Original Articles
  • Published:
Current Genetics Aims and scope Submit manuscript

Abstract

Extrachromosomal DNA elements were found in field isolates of Rhizoctonia solani belonging to anastomosis groups (AG) 1–5. An isolate of AG-5 (Rh41) contains a 3.6-kbp plasmid (pRS188) which has a similar A+T content to mitochondrial DNA. pRS188 is linear and has knob structures at its ends, as revealed by electron microscopy. Exonuclease digestions show that the linear ends of pRS188 are protected, and remain protected even after proteinase K digestion. pRS188 does not hybridise to nuclear or mitochondrial DNAs of its host isolate (Rh41), to total DNAs of other plasmid-less AG-5 isolates, or to total DNA of plasmid-harbouring isolates belonging to different AGs. Cellular-fractionation experiments suggest that pRS188 is associated with mitochondria, but it remains undecided whether this occurs inside or outside of the organelles. The nucleotide sequence of about 60% of the plasmid has been determined, revealing no open reading frame longer than 91 amino acids, and no known gene or genetic element is detected in the sequence contigs of 300–1572 bp length. Similar studies were performed with the plasmid pRS104 present in an isolate of AG-4 (Rh36), the sequence of which exhibits essentially the same features as pRS188 except that its A+T content resembles that of nuclear DNA. Pathogenicity tests reveal that the isolates Rh41 and R36 are as virulent as the plasmid-less isolates of AG-4 and-5, indicating that the plasmids do not play any role in pathogenicity.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Benne R, Van den Burg J, Brakenhoo JPJ, Sloof P, Van Boom JH, Tromp MC (1986) Major transcript of the frameshifted COXII gene from Trypanosome mitochondria contains four nucleotides that are not encoded in the DNA. Cell 47: 819–826

    Google Scholar 

  • Bertrand H, Griffith AJF, Court DA, Cheng CK (1986) An extrachromosomal plasmid is the etiological precursor of kalDNA insertion sequences in the mitochondrial chromosome of senescent Neurospora. Cell 47: 829–837

    Google Scholar 

  • Becklemann B, Osiewacz HD, Schmidt FR, Schulte E (1986) Extrachromosomal DNA in fungi. In: Buck KW (ed) Fungal virology. CRC Press, Boca Raton, Florida, pp 237–283

    Google Scholar 

  • Cardaso JE, Echandi E (1987) Biological control of Rhizoctonia root rot of snap bean with binucleate Rhizoctonia like fungi. Plant Dis 71: 167–170

    Google Scholar 

  • Caten CE (1972) Vegetative incompatibility and cytoplasmic infection in fungi. J Gen Microbiol 72: 221–229

    Google Scholar 

  • Chan BS, Court DA, Vierula PJ, Bertrand H (1991) The kalilo linear senescence-inducing plasmid of Neurospora is an invertron and encodes DNA and RNA polymerase. Curr Genet 20: 1–13

    Google Scholar 

  • Court DA, Bertrand H (1992) Genetic organization and structural features of maranhar, a senescence-inducing linear mitochondrial plasmid of Neurospora crassa. Curr Genet 22: 385–397

    Google Scholar 

  • Esser K, Kück U, Lang-Hinriches C, Lemke P, Osiewacz HD, Stahl U, Tudzynski P (1986) Plasmids of eukaryotes. Fundamentals and applications. Springer, Berlin Heidelberg, New York

    Google Scholar 

  • Futcher AB (1988) The 2 μ circle plasmid of Saccharomyces cerevisiae. Yeast 4: 27–40

    Google Scholar 

  • Garber RC, Yoder OC (1983) Isolation of DNA from filamentous fungi and separation into nuclear, mitochondrial, ribosomal, and plasmid components. Anal Biochem 135: 416–422

    Google Scholar 

  • Gunge N, Tamuru A, Ozawa F, Sakaguchi K (1981) Isolation and characterization of linear deoxyribonucleic acid plasmids from Kluyveromyces lactis and the plasmid-associated killer character. J Bacteriol 145: 382–390

    Google Scholar 

  • Hashiba T (1987) An improved system for biological control of damping-off by using plasmids in fungi. In: Chet I (ed) Innovative approaches to plant disease control. Wiley-Interscience Publication, New York, pp 337–351

    Google Scholar 

  • Hashiba T, Homma Y, Hyakumachi M, Matsuda I (1984) Isolation of a DNA plasmid in the fungus Rhizoctonia solani. J Gen Microbiol 130: 2067–2070

    Google Scholar 

  • Jabaji-Hare SJ, Meller Y, Gill S, Charest PM (1990) Investigation of genetic relatedness among anastomosis groups of Rhizoctonia solani using cloned DNA probes. Can J Plant Pathol 12: 393–404

    Google Scholar 

  • Kitada K, Hishinuma F (1987) A new linear DNA plasmid from the yeast Saccharomyces kluyveri. Mol Gen Genet 206: 377–381

    Google Scholar 

  • Lang BF, Burger G (1986) A collection of programs for nucleic acid and protein analysis: written in FORTRAN 77 for IBM-compatible microcomputers. Nucleic Acids Res 14: 455–465

    Google Scholar 

  • Lang BF, Burger G (1990) A rapid high-resolution DNA sequencing gel system. Analyt Biochem 188: 176–180

    Google Scholar 

  • Li Q, Nargang FE (1993) Two Neurospora mitochondrial plasmids encode DNA polymerases containing motifs characteristic of family-B DNA polymerase but lack the sequence Asp-Thr-Asp. Proc Natl Acad Sci USA 90: 4299–4303

    Google Scholar 

  • Ligon JM, Bolen PL, Hill DS, Bothast RJ, Kurtzman CP (1989) Physical and biological characterization of linear DNA plasmids of the yeast Pichia inositovora. Plasmid 21: 185–194

    Google Scholar 

  • Martin FN (1991) Characterization of circular mitochondrial plasmids in three Pythium species. Curr Genet 20: 91–97

    Google Scholar 

  • Meinhardt F, Kempken F, Kämper J, Esser K (1990) Linear plasmids among eukaryotes: fundamentals and application. Curr Genet 17: 89–95

    Google Scholar 

  • Miyasaka A, Chen CL, Hashiba T (1990) Detection and properties of plasmid-like DNA in isolates from nine anastomosis and intraspecific groups of Rhizoctonia solani. J Gen Microbiol 136: 1791–1798

    Google Scholar 

  • Miyashita S, Hirochika H, Ikeda JE, Hashiba T (1990) Linear plasmid DNAs of the plant pathogenic fungus Rhizoctonia solani with unique terminal structures. Mol Gen Genet 320: 165–171

    Google Scholar 

  • Mohan M, Meyer RJ, Anderson JB, Horgen PA (1984) Plasmid-like DNAs in the commercially important mushroom genus Agaricus. Curr Genet 8: 615–619

    Google Scholar 

  • Oeser B, Tudzynski P (1989) The linear mitochondrial plasmid pC1K1 of the phytopathogenic fungus Claviceps purpurea may code for a DNA polymerase and an RNA polymerase. Mol Gen Genet 217:132–140

    Google Scholar 

  • Pearson WR, Lipman DJ (1988) Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85:2444–2448

    Google Scholar 

  • Raeder U, Broda P (1985) Rapid preparation of DNA from filamentous fungi. Lett Appl Microbiol 1:17–20

    Google Scholar 

  • Robison MM, Royer JC, Horgen PA (1991) Homology between mitochondrial DNA of Agaricus bisporus and an internal portion of a linear mitochondrial plasmid of Agaricus bitorquis. Curr Genet 19:495–502

    Google Scholar 

  • Rohe M, Schründer J, Tudzynski P, Meinhardt F (1992) Phylogenetic relationships of linear, protein-primed replicating genomes. Curr Genet 21:173–176

    Google Scholar 

  • Samac A, Leong SA (1989) Mitochondrial plasmids of filamentous fungi: characteristics and use in transformation vectors. Mol Plant-Microbe Interact 2:155–159

    Google Scholar 

  • Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5467

    Google Scholar 

  • Shaw JM, Feagin JE, Stuart K, Simpson L (1988) L-editing of kinetoplastid mitochondrial messenger RNAs by uridine addition and deletion generates conserved amino-acid sequences and AUG initiation codons. Cell 53:401–411

    Google Scholar 

  • Shepherd HS (1992) Linear, non-mitochondrial plasmids of Alternaria alternata. Curr Genet 21:169–172

    Google Scholar 

  • Stam JC, Kwakman J, Meijer M, Stuitje AR (1986) Efficient isolation of the linear killer plasmid of Kluyveromyces lactis: evidence for location and expression in the cytoplasm and characterization of their terminally-bound proteins. Nucleic Acids Res 14:6871–6884

    Google Scholar 

  • Vieira J, Messing J (1987) Production of single-stranded plasmid DNA. Methods Enzymol 155:3–11

    Google Scholar 

  • Vierula PJ, Cheng CK, Court DA, Humphrey RW, Thomas DY, Bertrand H (1990) The kalilo senescence of plasmid of Neurospora intermedia has covalently-linked 5′ terminal proteins. Curr Genet 17:195–201

    Google Scholar 

  • Vilgalys R, Gonzalez D (1990) Ribosomal DNA restriction fragment polymorphisms in Rhizoctonia solani. Phytopathology 78:698–702

    Google Scholar 

  • Wang H, Kennel JC, Kuiper JR, Sebourin RH, Saldanha R, Lambowitz AM (1992) The Mauriceville plasmid of Neurospora crassa: characterization of a novel reverse transcriptase that begins cDNA synthesis at the 3′ end of template DNA. Mol Cell Biol 12:5131–5141

    Google Scholar 

  • Worsham PL, Bollen PL (1990) Killer toxin production in Pichia acaciae is associated with linear DNA plasmids. Curr Genet 18:77–80

    Google Scholar 

  • Zollinger M, Guertin M, Mamet-Bratley MD (1977) A new electron microscopic method for studying protein-nucleic acid interactions. Anal. Biochem 82:196–203

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by K. Wolf

Rights and permissions

Reprints and permissions

About this article

Cite this article

Jabaji-Hare, S.H., Burger, G., Forget, L. et al. Extrachromosomal plasmids in the plant pathogenic fungus Rhizoctonia solani . Curr Genet 25, 423–431 (1994). https://doi.org/10.1007/BF00351781

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00351781

Key words

Navigation