Abstract
We have analyzed the organization and the structure of rabbit κ chain genes encoding b allotypes in wild rabbits. The κ1 gene of the b95 allotype was cloned and its structure determined. The J region is composed of five segments but only J2 appears to be functional and is identical to the J2 segment of the b4 allotype. The J region is highly conserved among the various b allotypes, whereas the constant region exon displays a high level of differences when compared with other allotypes (9%–30% of different amino acids). The b95 J region is closer to that of b4var and the constant region to b5 allotype constant region. Alignment of nucleotide sequences revealed that the constant region exon displays segmental similarities with b4 and bas constant regions. The mosaic structure of b95 allotype gene indicates that complex allotypes of κ1 genes may result from genetic exchanges of gene conversion between the different κ genes.
Similar content being viewed by others
References
Akimenko, M. A., Heidmann, O., and Rougeon, F.: complex allotypes of the rabbit immunoglobulin kappa light chain are encoded by structural alleles. Nucleic Acids Res 12: 4691–4701, 1984
Akimenko, M. A., Mariamé, B., and Rougeon, F.: Evolution of immunoglobulin κ light chain locus in the rabbit: Evidence for differential gene conversion events. Proc Natl Acad Sci USA 83: 5180–5183, 1986
Akimenko, M. A., Ekker, M., Doyen, N., Biben, C., and Rougeon, F.: Determinant differences between the rabbit and mouse immunoglobulin κ enhancers impair the activity of the rabbit enhancer in mouse myeloma cells. Nucleic Acids Res 17: 4745–4755, 1989
Ayadi, H., Paroutaud, P., Benammar, A., Cazenave, P.-A., and Strosberg, A. D.: Structural studies of a wild rabbit immunoglobulin light chain constant region. Mol Immunol 20: 223–227, 1983
Benammar, A. and Cazenave, P.-A.: A second rabbit kappa isotype. J Exp Med 156: 585–595, 1982
Benammar, A., Brézin, C., and Cazenave, P.-A.: Rabbit immunoglobulin allotype: a sixth allele at the b locus (b95). Mol Immunol 16: 983–987, 1979
Benton, W. D. and Davis, R. W.: Screening λ gt recombinant clones by hybridization to single plaques in situ. Science 196: 180–182, 1977
Bernstein, K. E., Skurka, R. M. J., and Mage, R. G.: The sequences of rabbit κ light chains of b4 and b5 allotypes differ more in their constant regions than in their 3' untranslated regions. Nucleic Acids Res 11: 7205–7214, 1983
Bernstein, K. E., Lamoyi, E., McCartney-Francis, N., and Mage, R. G.: Sequence of a cDNA encoding basilea kappa light chains (κ2 isotype) suggest a possible relationship of protein structure to limited expression. J Exp Med 159: 635–640, 1984
Bruggeman, L. A.: PhD Thesis, University of West Virginia, Medical School, 1988
Cazenave, P.-A., Benammar, A., Sogn, J. A., and Kindt, T. J.: Immunoglobulin genes in the feral rabbit. In S. Dubiski (ed.): Immunoglobulin genes in the feral rabbit, pp. 148–163, Wiley and Longman, New York, 1987
Church, G. M., Ephrussi, A., Gilbert, A., and Tonegawa, S.: Cell type specific contacts to immunoglobulin enhancers in nucleic. Nature 313: 798–801, 1985
Dubiski, S. and Muller, P. J. A.: A “new” allotypic specificity (A9) of rabbit immunoglobulin. Nature 214: 696–697, 1967
Emorine, L. and Max, E. E.: Structural analysis of a rabbit immunoglobulin κ2J-C locus reveals multiple deletions. Nucleic Acids Res 11: 8877–8890, 1983
Emorine, L., Dreher, K., Kindt, T. J., and Max, E. E.: Rabbit immunoglobulin κ gene: Structure of a germ line b4 allotype J-C locus and evidence for several b4-related sequences in the rabbit genome. Proc Natl Acad Sci USA 80: 5709–5713, 1983a
Emorine, L., Kuehl, M., Weir, L., Leder, P., and Max, E. E.: A conserved sequence in the immunoglobulin J-C intron: Possible enhancer element. Nature 304: 447–449, 1983b
Emorine, L., Sogn, J. A., Trinh, D., Kindt, T. J., and Max, E. E.: A genomic gene encoding the b5 rabbit immunoglobulin κ constant region: Implication for latent allotype phenomenon. Proc Natl Acad Sci USA 81: 1789–1793, 1984
Ephrussi, A., Church, G. M., Tonegawa, S., and Gilbert, W.: B lineage specific interaction of an immunoglobulin enhancer with cellular factors in vivo. Science 227: 134–140, 1985
Esworthy, S. and Max, E. E.: Another J region gene cluster with only one functional J gene segment. J Immunol 136: 1107–1111, 1986
Falkner, F. G. and Zachau, H. G.: Correct transcription of an immunoglobulin κ gene requires an upstream fragment containing conserved sequence elements. Nature 310: 71–74, 1984
Heidmann, O. and Rougeon, F.: Diversity in the rabbit immunoglobulin κ chain variable regions is amplified by nucleotide deletions and insertion at the V-J junction. Cell 34: 767–777, 1983a
Heidmann, O. and Rougeon, F.: Multiplicity of constant kappa light chain genes in the rabbit genome: a b4 b4 homozygous rabbit contains a κ-bas gene. EMBO J 2: 437–441, 1983b
Hieter, P. A., Max, E. E., Seidman, J. G., Maizel, J. U. J., and Leder, P.: Cloned human and mouse κ immunoglobulin and J region genes conserve homology in functional segments. Cell 22: 197–207, 1980
Lenardo, M., Pierce, J. W., and Baltimore, D.: Protein-binding sites in Ig genes enhances determine transcriptional activity and inducibility. Science 236: 1573–1577, 1987
Mage, R. G.: Molecular biology of rabbit immunoglobulin and T cell receptor gene. In S. Dubiski (ed.): Molecular biology of rabbit immunoglobulin and T cell receptor gene, pp. 106–133, Wiley and Longman, New York, 1987
Mariamé, B., Akimenko, M. A., and Rougeon, F.: Interallelic and intergenic conversion events could induce differential evolution of the two rabbit immunoglobulin κ light chain genes. Nucleic Acids Res 15: 671–679, 1987
McCartney-Francis, N., Skurka, R. M. J., Mage, R., and Bernstein, K. E.: κ-chain allotypes and isotypes in the rabbit: cDNA sequences of clones encoding b9 suggest an evolutionary pathways and possible role of the interdomain disulfide bond in quantitative allotype expression. Proc Natl Acad Sci USA 81: 1794–1798, 1984
Messing, J. and Vieira, J.: A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments. Gene 19: 269–276, 1982
Oudin, J.: Allotypy of rabbit serum proteins. I. Immunochemical analysis leading to the individualization of seven main allotypes. J Exp Med 112: 107–125, 1960
Sanger, F., Nicklen, S., and Coulson, A. R.: DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467, 1977
Sen, R. and Baltimore, D.: Multiple nuclear factors interact with the immunoglobulin enhancer sequences. Cell 46: 705–716, 1986
Sheppard, H. W. and Gutman, G. A.: Complex allotypes of rat κ chains are encoded by structural alleles. Nature 293: 669–671, 1981a
Sheppard, H. W. and Gutman, G. A.: Allelic forms of rat κ chain genes: Evidence for strong selection at the level of nucleotide sequence. Proc Natl Acad Sci USA 78: 7064–7068, 1981b
Sogn, J. A. and Kindt, TJ.: A genetic polymorphism in the constant region of rabbit b4 kappa chain. J Exp Med 143: 1475–1482, 1976
Wilbur, W. J. and Lipman, D. J.: Rapid similarity searches of nucleic acid and protein data banks. Proc Natl Acad Sci USA 80: 726–730, 1983
Author information
Authors and Affiliations
Additional information
The nucleotide sequence data reported in this paper have been submitted to the GenBank nucleotide database and have been assigned the accession number M22542.
Address correspondence and offprint requests to: P.-A. Cazenave.
Rights and permissions
About this article
Cite this article
Ayadi, H., Marche, P.N. & Cazenave, PA. Evolution of the rabbit immunoglobulin κ chain genes. Immunogenetics 34, 201–207 (1991). https://doi.org/10.1007/BF00205825
Received:
Revised:
Issue Date:
DOI: https://doi.org/10.1007/BF00205825