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All you wanted to know about SELEX

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Abstract

In vitro selection, or SELEX, is a technique that allows the simultaneous screening of highly diverse pools of different RNA or DNA (dsDNA or ssDNA) molecules for a particular feature. Different examples from a great variety of applications ofin vitro selection experiments are described and a detailed overview of the method and its variations will be given. Some especially conclusivein vitro selection experiments are discussed in detail to illustrate the potential power and diversity of this method. Potential restrictions of the methods and possible ways to overcome them are pointed out.

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References

  1. Ellington AD & Szostak JW (1990) Nature 346: 818–822

    Google Scholar 

  2. Joyce GF (1989) Gene 82: 83–87

    Google Scholar 

  3. Tuerk C & Gold L (1990) Science 249: 505–510

    Google Scholar 

  4. Famulok M & Szostak JW (1992) Angew. Chem. Int. Ed. Engl. 31: 979–988

    Google Scholar 

  5. Szostak JW (1992) Trends Biochem. Sci. 17: 89

    Google Scholar 

  6. Famulok M & Szostak JW (1993) In: Eckstein F & Lilley DMJ (Eds) Nucleic Acids and Molecular Biology, Vol. 7 (pp: 271–281) Springer Verlag, Berlin

    Google Scholar 

  7. Szostak JW & Ellington AD (1993) In: Gesteland RF & Atkins JF (Eds) The RNA World (pp: 511–533) Cold Spring Harbor Laboratory Press, New York

    Google Scholar 

  8. Gold L, Tuerk C, Allen P, Binkley J, Brown D, Green L, MacDougal S, Schneider D, Tasset D & Eddy SR (1993) In: Gesteland RF & Atkins JF (Eds) The RNA World (pp: 479–509) Cold Spring Harbor Laboratory Press, New York

    Google Scholar 

  9. Famulok M (1994) J. Am. Chem. Soc. 116: 1698–1706

    Google Scholar 

  10. Connell GJ, Illangesekare M & Yarus M (1994) Biochemistry 32: 5497–5502

    Google Scholar 

  11. Ellington AD & Szostak JW (1990) Nature 3346: 818–822

    Google Scholar 

  12. Famulok M & Szostak JW (1992) J. Am. Chem. Soc. 114: 3990–3991

    Google Scholar 

  13. Jellinek D, Lynott CK, Rifkin DB & Janjic N (1993) Proc. Natl. Acad. Sci. USA 90: 11227–11231

    Google Scholar 

  14. Tuerk C, MacDougal S & Gold L (1992) Proc. Natl. Acad. Sci. USA 89: 6988–6992

    Google Scholar 

  15. Tuerk C & MacDougal-Waugh S (1993) Gene 137: 33–39

    Google Scholar 

  16. Scheider D & Gold L (1992) J. Mol. Biol. 228: 862–869

    Google Scholar 

  17. Paca-Uccaralertkun S, Zhao LJ, Adya N, Cross J, Cullen B, Boros IM & Giam CZ (1994) Mol. Cell. Biol. 1: 456–462

    Google Scholar 

  18. Harada K & Orgel LE (1993) Nucleic Acid Res. 21: 2287–2291

    Google Scholar 

  19. Schneider D, Gold L & Platt T (1993) FASEB J. 7: 201–207

    Google Scholar 

  20. Chen H & Gold L (1994) Biochemistry 33: 8746–8756

    Google Scholar 

  21. Liu F & Altman S (1994) Cell 77: 1093–1100

    Google Scholar 

  22. Green R, Ellington AD & Szostak JW (1990) Nature 347: 406–408

    Google Scholar 

  23. Green R & Szostak JW (1992) Science 258: 1910–1915

    Google Scholar 

  24. Pan T & Uhlenbeck OC (1992) Biochemistry 31: 3887–3895

    Google Scholar 

  25. Bartel DP & Szostak JW (1993) Science 261: 1411–1418

    Google Scholar 

  26. Robertson DL & Joyce GF (1990) Nature 344: 467–468

    Google Scholar 

  27. Famulok M & Faulhammer D (1994) Angew. Chem. Int. Ed. Engl. 33: in press.

  28. Lorsch JR & Szostak JW (1994) Nature, in press.

  29. Michel F, Jaquier A & Dujon B (1982) Biochimie 64: 867

    Google Scholar 

  30. Michel F & Westhof E (1990) J. Mol. Biol. 216: 585

    Google Scholar 

  31. Malim MH, Hauber J, Le SY, Maizel JV & Cullen BR (1989) Nature 338: 254–257

    Google Scholar 

  32. Sodroski J, Goh WC, Rosen C, Dayton A, Terwillinger E & Hasseltine WA (1986) Nature 321: 412–417

    Google Scholar 

  33. Zapp ML & Green MR (1989) Nature 342: 714–716

    Google Scholar 

  34. Holland SM, Ahmad N, Maitra RK, Wingfield P & Venkatesan S (1990) J. Virology 64: 5966–5975

    Google Scholar 

  35. Malim MH, Tiley LS, McCarn DF, Rusche JR, Hauber J & Cullen BR (1990) Cell 60: 675

    Google Scholar 

  36. Heaphy S, Dingwall C, Ernberg I, Gait MJ, Green SM, Karn J, Lowe AD, Singh M & Skinner MA (1990) Cell 60: 685

    Google Scholar 

  37. Bartel DP, Zapp ML, Green MR & Szostak JW (1991) Cell 67: 529–536

    Google Scholar 

  38. Giver L, Bartel DP, Zapp ML, Green MR & Ellington AD (1993) Gene 137: 19–24

    Google Scholar 

  39. Leclerc F, Cedergren R & Ellington AD (1994) Nature struct. Biol. 1: 293–299

    Google Scholar 

  40. Bock LC, Griffin LC, Latham JA, Vermaas EH & Toole JJ (1992) Nature 355: 564–566

    Google Scholar 

  41. Wang KY, McCurdy S, Shea RG, Swaminathan S & Bolton PH (1993) Biochemistry 32: 1899–1904

    Google Scholar 

  42. Macaya RF, Schulze P, Smith FW, Roe JA & Feigon J (1993) Proc. Natl. Acad. Sci. USA 90: 3745

    Google Scholar 

  43. Weiss S, Häusl G, Famulok M & König B (1993) Nucl. Acids Res. 21: 4879

    Google Scholar 

  44. Latham JA, Johnson R & Toole JJ (1994) Nucleic Acid Res. 22: 2817–2822

    Google Scholar 

  45. Kubrik MF, Stephens AW, Schneider D, Marlar RA & Tasset D (1994) Nucleic Acid Res. 22: 2619–2626

    Google Scholar 

  46. Sassanfar M & Szostak JW (1993) Nature 364: 550–553

    Google Scholar 

  47. Burgstaller P & Famulok M (1994) Angewandte Chemie Int. Ed. Engl. 33: 1084–1087

    Google Scholar 

  48. Lorsch JR & Szostak JW (1994) Biochemistry 33: 973–982

    Google Scholar 

  49. Ellington AD (1994) Current Biol. 4: 427–429

    Google Scholar 

  50. Szathmary E (1993) Proc. Natl. Acad Sci. USA 90: 9916–9921

    Google Scholar 

  51. Yarus M (1993) In the RNA world, Cold Spring Harbor, NY, pp 205–217

  52. Jenison RD, Gill SC, Pardi A & Polisky B. (1994) Science 263: 1425–1429

    Google Scholar 

  53. Hendeles L & Weinberger M (1983) Pharmacotheraphy 3: 2–7

    Google Scholar 

  54. Poncelet SM, Limet JN, Noel JP, Kayaert MC, Galanti L & Collet-Cassart D (1990) J. Immunoassay 11: 77–81

    Google Scholar 

  55. Wilson C & Szostak JW, manuscript submitted.

  56. Lauthon CT & Szostak JW, manuscript submitted.

  57. Lehman N & Joyce GF (1993) Nature 361: 182–185

    Google Scholar 

  58. Beaudry AA & Joyce GF (1992) Science 257: 635–641

    Google Scholar 

  59. Robertson DL & Joyce GF (1990) Nature 344: 467–468

    Google Scholar 

  60. Cadwell, RC & Joyce GF (1992) PCR Meth. Appl. 2: 28–33

    Google Scholar 

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Klug, S.J., Famulok, M. All you wanted to know about SELEX. Mol Biol Rep 20, 97–107 (1994). https://doi.org/10.1007/BF00996358

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  • DOI: https://doi.org/10.1007/BF00996358

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