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Molecular characterization of an active wheat LMW glutenin gene and its relation to other wheat and barley prolamin genes

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Summary

The isolation and characterisation by DNA sequencing of a low molecular weight (LMW) glutenin gene from wheat is described. The deduced protein contains a signal peptide, a central repetitive region rich in proline and glutamine and N and C terminal non-repetitive domains, similar to other prolamins. A detailed comparison of the C terminal domain of 20 prolamin genes enabled us to divide them into 4 families. The LMW glutenin family is distinct from the α, β-and γ-gliadin families of wheat and is closest to the B hordein genes of barley. This and other comparisons were also used to assess the pattern of genetic variation among prolamin sequences and to provide a molecular basis for the interpretation of prolamin size polymorphism. The 5′ flanking fragment of the isolated gene was previously shown to direct endosperm-specific expression of a reporter gene in transgenic tobacco. Evidence is provided that the isolated gene is also active in wheat and its transcription initiation site was determined. Features of the gene which may be relevant to its activity are discussed.

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References

  • Antequera F, Bird AP (1988) Unmethylated CpG islands associated with genes in higher plant DNA. EMBO J 7:2295–2299

    Google Scholar 

  • Bartels D, Thompson RD (1983) The characterization of cDNA clones coding for wheat storage proteins. Nucleic Acids Res 11:2961–2977

    Google Scholar 

  • Bartels D, Thompson RD (1986) Synthesis of mRNAs coding for abundant endosperm proteins during wheat grain development. Plant Sci 46:117–125

    Google Scholar 

  • Bartels D, Altosaar I, Harberd NP, Barker RD, Thompson RD (1986) Molecular analysis of gamma-gliadin gene families at the complex Gli-1 locus of bread wheat (T. aestivum L.). Theor Appl Genet 72:845–853

    Google Scholar 

  • Brandt A, Montenbault A, Cameron-Mills V, Rasmussen SK (1985) Primary structure of a B1 hordein gene from barley. Carlsberg Res Commun 50:333–345

    Google Scholar 

  • Buratowski S, Hahn S, Sharp PA, Guarente L (1988) Function of a yeast TATA element-binding protein in a mammalian transcription system. Nature 334:37–42

    Google Scholar 

  • Calladine CR, Drew HR, McCall MJ (1988) The intrinsic curvature of DNA in solution. J Mol Biol 201:127–137

    Google Scholar 

  • Cameron JR, Philippsen P, Davies RW (1977) Analysis of chromosomal integration and deletions of yeast plasmids. Nucleic Acids Res 4:1429–1448

    Google Scholar 

  • Cato ACB, Skroch P, Weinmann J, Butkeraitis P, Ponta H (1988) DNA sequences outside the receptor-binding sites differentially modulates the responsiveness of the mouse mammary tumour virus promoter to various steroid hormones. EMBO J 7:1403–1410

    Google Scholar 

  • Cavallini B, Huet J, Plassat J-L, Sentenac A, Egly JM, Chambon P (1988) A yeast activity can substitute for the HeLa cell TATA box factor. Nature 334:77–80

    Google Scholar 

  • Cedar H (1988) DNA methylation and gene activity. Cell 53:3–4

    Google Scholar 

  • Colot V, Roberts LS, Kavanagh TA, Bevan MW, Thompson RD (1987) Localization of sequences in wheat endosperm protein genes which confer tissue-specific expression in tobacco. EMBO J 6:3559–3564

    Google Scholar 

  • Dean C, Tamaki S, Dunsmuir P, Faveau M, Katayama C, Dooner H, Bedbrook J (1986) mRNA transcripts of several plant genes are polyadenylated at multiple sites in vivo. Nucleic Acids Res 14:2229–2240

    Google Scholar 

  • Devereux J, Haeberli P, Smithies O (1984) A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12:387–395

    Google Scholar 

  • Dover GA, Tautz D (1986) Conservation and divergence in multigene families: alternatives to selection and drift. Philos Trans R Soc Lond [Biol] 312:275–289

    Google Scholar 

  • Entwistle J (1988) Primary structure of a C-hordein gene from barley. Carlsberg Res Commun 53:247–258

    Google Scholar 

  • Fedoroff N (1983) Notes on cloning maize DNA. Maize Genet Co-op Newslett 57:154 (Add)

    Google Scholar 

  • Forde BG, Kreis M, Williamson MS, Fry RP, Pywell J, Shewry PR, Bunce N, Miflin BJ (1985a) Short tandem repeats shared by B-and C-hordein cDNAs suggest a common evolutionary origin for two groups of cereal storage protein genes. EMBO J 4:9–15

    Google Scholar 

  • Forde BG, Heyworth A, Pywell J, Kreis M (1985b) Nucleotide sequence of a B1 hordein gene and the identification of possible upstream regulatory elements in endosperm storage protein genes from barley, wheat and maize. Nucleic Acids Res 13:7327–7339

    Google Scholar 

  • Guarente L (1988) UASs and enhancers: common mechanism of transcriptional activation in yeast and mammals. Cell 52:303–305

    Google Scholar 

  • Halford NG, Forde J, Anderson OD, Greene FC, Shewry PR (1987) The nucleotide and deduced amino acid sequences of a HMW glutenin subunit gene from chromosome 1B of bread wheat (Triticum aestivum L.) and comparison with those of genes from chromosomes 1A and 1D. Theor Appl Genet 75:117–126

    Google Scholar 

  • Harberd NP, Bartels D, Thompson RD (1985) Analysis of the gliadin multigene loci in bread wheat using nullisomic-tetrasomic lines. Mol Gen Genet 198:234–242

    Google Scholar 

  • Henikoff S (1984) Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene 28:351–359

    Google Scholar 

  • Kasarda DD, Lafiandr D, Morris R, Shewry PR (1984) Genetic relationships of wheat gliadin proteins. Kulturpflanze 32:41–60 (Suppl)

    Google Scholar 

  • Koo H-S, Crothers DM (1988) Calibration of DNA curvature and a unified description of sequence-directed bending. Proc Natl Acad Sci USA 85:1763–1767

    Google Scholar 

  • Kovacs BJ, Butterworth PHW (1986) The effect of changing the distance between the TATA-box and Cap site by up to three base pairs on the selection of the transcriptional start site of a cloned eukaryotic gene in vitro and in vivo. Nucleic Acids Res 14:2429–2441

    Google Scholar 

  • Kozak M (1986) Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44:283–292

    Google Scholar 

  • Kreis M, Forde BG, Rhaman S, Miflin BJ, Shewry PR (1985a) Molecular evolution of the seed storage proteins of barley, rye and wheat. J Mol Biol 183:499–502

    Google Scholar 

  • Kreis M, Shewry PR, Forde BG, Forde J, Miflin BJ (1985b) Structure and evolution of seed storage proteins and their genes with particular reference to those of wheat, barley and rye. Oxford Surveys Plant Mol Cell Biol 2:253–317

    Google Scholar 

  • Loenen WAM, Blattner FR (1983) Lambda Charon vectors (Ch 32, 33, 34 and 35) adapted for DNA cloning in recombination deficient hosts. Gene 26:171–179

    Google Scholar 

  • Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbour Laboratory Press, Cold Spring Harbor, New York

    Google Scholar 

  • Messing J (1983) New M13 vectors for cloning. Methods Enzymol 101:20–78

    Google Scholar 

  • Nasmyth KA (1983) Molecular analysis of a cell lineage. Nature 302:670–676

    Google Scholar 

  • Okita TW (1984) Identification and DNA sequence analysis of a gamma-type gliadin cDNA plasmid from winter wheat. Plant Mol Biol 3:325–332

    Google Scholar 

  • Okita TW, Cheesebrough V, Reeves CD (1985) Evolution and heterogeneity of the alpha-/beta-type and gamma-type gliadin DNA sequences. J Biol Chem 260:8203–8213

    Google Scholar 

  • Ondek B, Gloss L, Herr W (1988) The SV40 enhancer contains two distinct levels of organisation. Nature 333:40–45

    Google Scholar 

  • Payne PI (1987) Genetics of wheat storage proteins and the effect of allelic variation on bread-making quality. Annu Rev Plant Physiol 38:141–153

    Google Scholar 

  • Payne PI, Holt LM, Jackson EA, Law CN (1984) Wheat storage proteins: their genetics and their potential for manipulation by plant breeding. Philos Trans R Soc Lond [Biol] 304:359–371

    Google Scholar 

  • Peticolas WL, Wang Y, Thomas GA (1988) Some rules for predicting the base-sequence dependence of DNA conformation. Proc Natl Acad Sci USA 85:2579–2583

    Google Scholar 

  • Pfeifer K, Arcangioll B, Guarente L (1987) Yeast HAP1 activator competes with the factor RC2 for binding to the upstream activation site UAS1 of the CYC1 gene. Cell 49:9–18

    Google Scholar 

  • Rafalski JA (1986) Structure of wheat gamma-gliadin genes. Gene 43:221–229

    Google Scholar 

  • Rahman S, Kreis M, Forde BG, Shewry PR, Miflin BJ (1984) Hordein-gene expression during development of a barley (Hordeum vulgare) endosperm. Bioche J 223:315–322

    Google Scholar 

  • Reeves CD, Krishnan HB, Okita TWJ (1986) Gene expression in developing wheat endosperm. Accumulation of gliadin and ADPglucose pyrophorylase messenger RNAs. Plant Physiol 82:34–40

    Google Scholar 

  • Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5476

    Google Scholar 

  • Schirm S, Jiricny J, Schaffner W (1987) The SV40 enhancer can be dissected into multiple segments, each with a different cell type specificity. Genes Devel 1:65–74

    Google Scholar 

  • Sears ER (1966) Nullisomic-tetrasomic combination in hexaploid wheat. In: Riley R, Lewis KR (eds) Chromosome manipulation and plant genetics. Oliver and Boyd, Edinburgh, pp 29–45

    Google Scholar 

  • Shewry PR, Miflin BJ, Lew EJ-L, Kasarda DD (1984) The preparation and characterization of an aggregated gliadin fraction from wheat. J Exp Bot 34:1403–1410

    Google Scholar 

  • Staden R (1982) An interactive graphics program for comparing and aligning nucleic acid and amino acid sequences. Nucleic Acids Res 10:2951–2961

    Google Scholar 

  • Struhl K (1987) The DNA-binding domains of the jun oncoprotein and the yeast GCN4 transcriptional activator protein are functionally homologous. Cell 50:841–846

    Google Scholar 

  • Struhl K (1988) The JUN oncoprotein, a vertebrate transcription factor, activates transcription in yeast. Nature 332:649–650

    Google Scholar 

  • Sugiyama T, Rafalski A, Soll D (1986) The nucleotide sequence of a wheat gamma-gliadin genomic clone. Plant Sci 44:205–209

    Google Scholar 

  • Sumner-Smith A, Rafalski JA, Sugiyama T, Stoll M, Soll D (1985) Conservation and variability of wheat alpha/beta-gliadin genes. Nucleic Acids Res 13:3905–3916

    Google Scholar 

  • Thompson RD, Bartels D, Harberd NP, Flavell RB (1983) Characterization of the multigene family coding for HMW glutein subunits in wheat using cDNA clones. Theor Appl Genet 67:87–96

    Google Scholar 

  • Thompson RD, Bartels D, Harberd NP (1985) Nucleotide sequence of a gene from chromosome 1D of wheat encoding a HMW-subunit. Nucleic Acids Res 13:6833–6846

    Google Scholar 

  • von Heijne G (1985) Signal sequences: the limits of variation. J Mol Biol 184:99–105

    Google Scholar 

Download references

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Communicated by H. Saedler

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Colot, V., Bartels, D., Thompson, R. et al. Molecular characterization of an active wheat LMW glutenin gene and its relation to other wheat and barley prolamin genes. Mol Gen Genet 216, 81–90 (1989). https://doi.org/10.1007/BF00332234

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  • DOI: https://doi.org/10.1007/BF00332234

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